RNA–Protein interactions for RNA: ENST00000373995.7

A1CF-203, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 2,211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-203ENST00000373995 LHX9Q9NQ69 397 aa11.65□□□□□ -0.54
A1CF-203ENST00000373995 IFT46Q9NQC8 304 aa11.65□□□□□ -0.54
A1CF-203ENST00000373995 THUMPD1Q9NXG2 353 aaKnown RBP11.65□□□□□ -0.54
A1CF-203ENST00000373995 FOXJ2Q9P0K8 574 aa11.65□□□□□ -0.54
A1CF-203ENST00000373995 FRYQ5TBA9 3013 aa11.65□□□□□ -0.54
A1CF-203ENST00000373995 FAM25AB3EWG3 89 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 FAM25CB3EWG5 89 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 FAM25GB3EWG6 89 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 ZNF195O14628 629 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 PIP5K1BO14986 540 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 SLC22A2O15244 555 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 FOXS1O43638 330 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 EDF1O60869 148 aaKnown RBP11.64□□□□□ -0.55
A1CF-203ENST00000373995 SPINK2P20155 84 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 G0S2P27469 103 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 CAPZA1P52907 286 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 STX5Q13190 355 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 ATP1A4Q13733 1029 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 TOR1AIP1Q5JTV8 583 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 ZNF385CQ66K41 422 aaPredicted RBP11.64□□□□□ -0.55
A1CF-203ENST00000373995 NANOGP8Q6NSW7 305 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 JMJD6Q6NYC1 403 aaPredicted RBP11.64□□□□□ -0.55
A1CF-203ENST00000373995 ABHD17CQ6PCB6 329 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 PDSS2Q86YH6 399 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 HIPK1Q86Z02 1210 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 CRLF3Q8IUI8 442 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 CYP4Z2PQ8N1L4 340 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 TTC29Q8NA56 475 aaPredicted RBP11.64□□□□□ -0.55
A1CF-203ENST00000373995 OR2T11Q8NH01 316 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 DTD1Q8TEA8 209 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 FBXW5Q969U6 566 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 GAL3ST3Q96A11 431 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 MVB12AQ96EY5 273 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 ZNF317Q96PQ6 595 aaPredicted RBP11.64□□□□□ -0.55
A1CF-203ENST00000373995 UCN2Q96RP3 112 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 SERPINI1Q99574 410 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 SLC25A23Q9BV35 468 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 MROQ9BYG7 248 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 LRMDAQ9H2I8 198 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 COA4Q9NYJ1 87 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 DHCR7Q9UBM7 475 aaKnown RBP11.64□□□□□ -0.55
A1CF-203ENST00000373995 MARCOQ9UEW3 520 aaPredicted RBP11.64□□□□□ -0.55
A1CF-203ENST00000373995 ACSL6Q9UKU0 697 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 MSRB2Q9Y3D2 182 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 TMEM184BQ9Y519 407 aaPredicted RBP11.64□□□□□ -0.55
A1CF-203ENST00000373995 A0A1B0GX78 115 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 URADA6NGE7 173 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 CLDN4O14493 209 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 ERI3O43414 337 aaKnown RBP11.64□□□□□ -0.55
A1CF-203ENST00000373995 EIF1BO60739 113 aaKnown RBP11.64□□□□□ -0.55
A1CF-203ENST00000373995 CPNE3O75131 537 aaKnown RBP11.64□□□□□ -0.55
A1CF-203ENST00000373995 WDPCPO95876 746 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 DLGAP3O95886 979 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 NTRK1P04629 796 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 ZNF888P0CJ79 500 aaPredicted RBP11.64□□□□□ -0.55
A1CF-203ENST00000373995 PRPH2P23942 346 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 EIF1P41567 113 aaKnown RBP11.64□□□□□ -0.55
A1CF-203ENST00000373995 KIR3DL2P43630 455 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 CCR9P51686 369 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 HMGCS1Q01581 520 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 TOP3AQ13472 1001 aaPredicted RBP11.64□□□□□ -0.55
A1CF-203ENST00000373995 SCIMPQ6UWF3 145 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 ZNF517Q6ZMY9 492 aaPredicted RBP11.64□□□□□ -0.55
A1CF-203ENST00000373995 TTLL10Q6ZVT0 673 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 PTCHD4Q6ZW05 846 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 ABHD13Q7L211 337 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 PRSS41Q7RTY9 318 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 MAVSQ7Z434 540 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 KIF2BQ8N4N8 673 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 DTWD1Q8N5C7 304 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 TESCQ96BS2 214 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 C3orf30Q96M34 536 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 ULBP3Q9BZM4 244 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 PRDM7Q9NQW5 492 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 VPS29Q9UBQ0 182 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 NAALAD2Q9Y3Q0 740 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 FER1L5A0AVI2 2057 aa11.64□□□□□ -0.55
A1CF-203ENST00000373995 A0A1W2PRG6 482 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 TRABD2BA6NFA1 517 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 PLPP1O14494 284 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 DSCR3O14972 297 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 GALR3O60755 368 aaPredicted RBP11.63□□□□□ -0.55
A1CF-203ENST00000373995 GPX5O75715 221 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 STK17BO94768 372 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 CCNB2O95067 398 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 SCELO95171 688 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 NSA2O95478 260 aaKnown RBP11.63□□□□□ -0.55
A1CF-203ENST00000373995 ONECUT2O95948 504 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 CD63P08962 238 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 LINC00032P0C843 101 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 TSFMP43897 325 aaKnown RBP11.63□□□□□ -0.55
A1CF-203ENST00000373995 PLA2G16P53816 162 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 RAB8AP61006 207 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 MAT1AQ00266 395 aaKnown RBP11.63□□□□□ -0.55
A1CF-203ENST00000373995 BTKQ06187 659 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 COL9A2Q14055 689 aaPredicted RBP11.63□□□□□ -0.55
A1CF-203ENST00000373995 NDUFA9Q16795 377 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 DEFB134Q4QY38 66 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 SPATC1Q76KD6 591 aa11.63□□□□□ -0.55
A1CF-203ENST00000373995 FNDC5Q8NAU1 212 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms