RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 CGAP01215 116 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 CD8BP10966 210 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 GRK2P25098 689 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 KRT20P35900 424 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 ALDH9A1P49189 494 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 DSCR4P56555 118 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 CLDN15P56746 228 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 EEFSECP57772 596 aaKnown RBP11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 FAM180BQ6P0A1 224 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 LARP4Q71RC2 724 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 SAMD14Q8IZD0 417 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 MEIOBQ8N635 442 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 C1orf52Q8N6N3 182 aaKnown RBP11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 CNEP1R1Q8N9A8 125 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 PPP1R14CQ8TAE6 165 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 SELENOMQ8WWX9 145 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 VSTM2LQ96N03 204 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 GSX2Q9BZM3 304 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 RAB17Q9H0T7 212 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 OPN3Q9H1Y3 402 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 UBTD1Q9HAC8 227 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 HEY2Q9UBP5 337 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 VPS29Q9UBQ0 182 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 UTS2RQ9UKP6 389 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 SNX6Q9UNH7 406 aa11.81□□□□□ -0.52
TRAPPC3-201ENST00000373159 SONP18583 2426 aaKnown RBP11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 TRIM64A6NGJ6 449 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 TRIM64BA6NI03 449 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 LINC01387J3KSC0 135 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 PPP6CO00743 305 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 SMAD7O15105 426 aaKnown RBP11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 PLOD3O60568 738 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 SMIM24O75264 130 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 POU2F1P14859 743 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 LOXP28300 417 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 PCSK6P29122 969 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 MAGEA12P43365 314 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 CORO7P57737 925 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 MRPS22P82650 360 aaKnown RBP11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 OCRLQ01968 901 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 FGFBP1Q14512 234 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 UAP1Q16222 522 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 FADS6Q8N9I5 356 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 OR4K17Q8NGC6 315 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 FIG4Q92562 907 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 PERPQ96FX8 193 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 ZNF845Q96IR2 970 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 C1QTNF3Q9BXJ4 246 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 ANKRA2Q9H9E1 313 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 RNF122Q9H9V4 155 aa11.8□□□□□ -0.52
TRAPPC3-201ENST00000373159 RPS17P08708 135 aaKnown RBP11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 CTAGE8P0CG41 777 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 COL6A2P12110 1019 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 HSD3B1P14060 373 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 PAX1P15863 534 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 HSD3B2P26439 372 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 IL12BP29460 328 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 CCKARP32238 428 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 KCNJ5P48544 419 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 SUCLG1P53597 346 aaKnown RBP11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 C2orf54Q08AI8 447 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 ERCC6LQ2NKX8 1250 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 TSNAXIP1Q2TAA8 658 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 LETMD1Q6P1Q0 360 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 NPSR1Q6W5P4 371 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 C22orf34Q6ZV56 151 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 CTAGE4Q8IX94 777 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 UBQLNLQ8IYU4 475 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 ZNF610Q8N9Z0 462 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 OR2M3Q8NG83 312 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 ZNF483Q8TF39 744 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 IGFBPL1Q8WX77 278 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 KAT2AQ92830 837 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 CAVIN3Q969G5 261 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 HS3ST6Q96QI5 342 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 MRPL57Q9BQC6 102 aaKnown RBP11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 STMN4Q9H169 189 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 DSN1Q9H410 356 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 ACSS3Q9H6R3 686 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 FOLH1BQ9HBA9 442 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 PFDN4Q9NQP4 134 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 XPR1Q9UBH6 696 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 TRPS1Q9UHF7 1281 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 MCM8Q9UJA3 840 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 ZNF225Q9UK10 706 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 ZNF337Q9Y3M9 751 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 ZNF175Q9Y473 711 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 DSCAMO60469 2012 aa11.79□□□□□ -0.52
TRAPPC3-201ENST00000373159 INAFM1C9JVW0 142 aa11.78□□□□□ -0.52
TRAPPC3-201ENST00000373159 H0YC42 278 aa11.78□□□□□ -0.52
TRAPPC3-201ENST00000373159 FADS1O60427 444 aa11.78□□□□□ -0.52
TRAPPC3-201ENST00000373159 NME6O75414 186 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC3-201ENST00000373159 CNOT4O95628 575 aaKnown RBP11.78□□□□□ -0.52
TRAPPC3-201ENST00000373159 ESRRBO95718 433 aa11.78□□□□□ -0.52
TRAPPC3-201ENST00000373159 IL3P08700 152 aa11.78□□□□□ -0.52
TRAPPC3-201ENST00000373159 HK1P19367 917 aa11.78□□□□□ -0.52
TRAPPC3-201ENST00000373159 TBXA2RP21731 343 aa11.78□□□□□ -0.52
TRAPPC3-201ENST00000373159 TCEA1P23193 301 aaKnown RBP11.78□□□□□ -0.52
TRAPPC3-201ENST00000373159 PHBP35232 272 aa11.78□□□□□ -0.52
TRAPPC3-201ENST00000373159 PTH2RP49190 550 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms