RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 SNAPC1Q16533 368 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 TBC1D25Q3MII6 688 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 TRMT12Q53H54 448 aaKnown RBP17.52■□□□□ 0.4
USP49-202ENST00000373010 NIPAL1Q6NVV3 410 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 CDC73Q6P1J9 531 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 ZNF730Q6ZMV8 503 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 OR8D4Q8NGM9 314 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 FAM3CQ92520 227 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 FAM46AQ96IP4 442 aaKnown RBP17.52■□□□□ 0.4
USP49-202ENST00000373010 ZNF582Q96NG8 517 aaPredicted RBP17.52■□□□□ 0.4
USP49-202ENST00000373010 NXF2Q9GZY0 626 aaKnown RBP17.52■□□□□ 0.4
USP49-202ENST00000373010 CCDC59Q9P031 241 aaKnown RBP17.52■□□□□ 0.4
USP49-202ENST00000373010 SCG5P05408 212 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 CD40LGP29965 261 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 PPP5CP53041 499 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 DNASE1L3Q13609 305 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 SPHARQ15513 63 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 DUSP5Q16690 384 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 CCNJQ5T5M9 372 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 NKAIN4Q8IVV8 208 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 SLC22A18ASQ8N1D0 253 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 GNPDA2Q8TDQ7 276 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 FGF11Q92914 225 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 POLE4Q9NR33 117 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 NTMQ9P121 344 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 SLC22A7Q9Y694 548 aa17.52■□□□□ 0.4
USP49-202ENST00000373010 CENPVL1A0A0U1RR11 272 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 LDB3O75112 727 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 APOL3O95236 402 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 HBQ1P09105 142 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 ACP2P11117 423 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 CPMP14384 443 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 GSTM3P21266 225 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 TLX1P31314 330 aaPredicted RBP17.51■□□□□ 0.39
USP49-202ENST00000373010 PRKAR1BP31321 381 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 SMSP52788 366 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 RGS8P57771 180 aaPredicted RBP17.51■□□□□ 0.39
USP49-202ENST00000373010 ZNF761Q86XN6 746 aaPredicted RBP17.51■□□□□ 0.39
USP49-202ENST00000373010 OR2L13Q8N349 312 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 CAMKVQ8NCB2 501 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 ZFYVE21Q9BQ24 234 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 SAP130Q9H0E3 1048 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 GPR52Q9Y2T5 361 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 AGAP5A6NIR3 686 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 DUXAA6NLW8 204 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 WWP2O00308 870 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 SEMA4FO95754 770 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 THY1P04216 161 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 ALOX12P18054 663 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 PTNP21246 168 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 YPEL5P62699 121 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 EFNB1P98172 346 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 ST3GAL3Q11203 375 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 SFSWAPQ12872 951 aaKnown RBP17.51■□□□□ 0.39
USP49-202ENST00000373010 PUS10Q3MIT2 529 aaKnown RBP17.51■□□□□ 0.39
USP49-202ENST00000373010 TYW3Q6IPR3 259 aaKnown RBP17.51■□□□□ 0.39
USP49-202ENST00000373010 PLEKHM3Q6ZWE6 761 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 NANOGP1Q8N7R0 232 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 TMEM52Q8NDY8 209 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 OR5T3Q8NGG3 340 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 OR52I1Q8NGK6 324 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 TEX47Q8TBZ9 253 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 MCHR1Q99705 422 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 MND1Q9BWT6 205 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 EXOSC4Q9NPD3 245 aaKnown RBP17.51■□□□□ 0.39
USP49-202ENST00000373010 CPNE7Q9UBL6 633 aa17.51■□□□□ 0.39
USP49-202ENST00000373010 ZNF443Q9Y2A4 671 aaPredicted RBP17.51■□□□□ 0.39
USP49-202ENST00000373010 URADA6NGE7 173 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 PPP1CAP62136 330 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 EOGTQ5NDL2 527 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 CLEC12AQ5QGZ9 265 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 USP53Q70EK8 1073 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 ABHD13Q7L211 337 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 CNPPD1Q9BV87 410 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 QPCTLQ9NXS2 382 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 KLHL28Q9NXS3 571 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 CARD8Q9Y2G2 431 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 WDR45Q9Y484 360 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 AP3D1O14617 1153 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 CDH3P22223 829 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 OMPP47874 163 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 RNF144AP50876 292 aaPredicted RBP17.5■□□□□ 0.39
USP49-202ENST00000373010 TSPAN31Q12999 210 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 TIMM50Q3ZCQ8 353 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 ZNF836Q6ZNA1 936 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 RRM2BQ7LG56 351 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 RERGQ96A58 199 aaPredicted RBP17.5■□□□□ 0.39
USP49-202ENST00000373010 MSLNLQ96KJ4 702 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 ADAP2Q9NPF8 381 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 ABCB10Q9NRK6 738 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 STARD5Q9NSY2 213 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 A3GALT2U3KPV4 340 aa17.5■□□□□ 0.39
USP49-202ENST00000373010 TDRD6O60522 2096 aaKnown RBP17.5■□□□□ 0.39
USP49-202ENST00000373010 KNL1Q8NG31 2342 aa17.49■□□□□ 0.39
USP49-202ENST00000373010 PIP5K1CO60331 668 aa17.49■□□□□ 0.39
USP49-202ENST00000373010 UBXN7O94888 489 aa17.49■□□□□ 0.39
USP49-202ENST00000373010 TNFP01375 233 aa17.49■□□□□ 0.39
USP49-202ENST00000373010 PORP16435 677 aaPredicted RBP17.49■□□□□ 0.39
USP49-202ENST00000373010 TGM1P22735 817 aa17.49■□□□□ 0.39
USP49-202ENST00000373010 ETV5P41161 510 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms