RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 OR1M1Q8NGA1 313 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 OR1S1Q8NH92 325 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 NXPE3Q969Y0 559 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 PCDHGC4Q9Y5F7 938 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 C2orf78A6NCI8 922 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 LINC00587B1AMM8 73 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 ZNF593O00488 134 aaPredicted RBP17.25■□□□□ 0.35
MMP9-201ENST00000372330 SSX5O60225 188 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 OR10H3O60404 316 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 KLKB1P03952 638 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 DGKGP49619 791 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 MVDP53602 400 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 RAP2BP61225 183 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 SHC2P98077 582 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 CDK6Q00534 326 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 DEFA5Q01523 94 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 GAB1Q13480 694 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 PUM1Q14671 1186 aaKnown RBP eCLIP17.25■□□□□ 0.35
MMP9-201ENST00000372330 HLXQ14774 488 aaPredicted RBP17.25■□□□□ 0.35
MMP9-201ENST00000372330 TCTN1Q2MV58 587 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 NCEH1Q6PIU2 408 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 ALKAL2Q6UX46 152 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 DEF8Q6ZN54 512 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 WDR53Q7Z5U6 358 aaPredicted RBP17.25■□□□□ 0.35
MMP9-201ENST00000372330 CCDC36Q8IYA8 594 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 ZNF485Q8NCK3 441 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 TMIEQ8NEW7 156 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 FBXO22Q8NEZ5 403 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 OR52N2Q8NGI0 321 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 NFKBIDQ8NI38 313 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 PXYLP1Q8TE99 480 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 C11orf24Q96F05 449 aaPredicted RBP17.25■□□□□ 0.35
MMP9-201ENST00000372330 ABHD1Q96SE0 405 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 TMED9Q9BVK6 235 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 TBC1D17Q9HA65 648 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 SLAMF7Q9NQ25 335 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 EQTNQ9NQ60 294 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 RPS6KB2Q9UBS0 482 aa17.25■□□□□ 0.35
MMP9-201ENST00000372330 GPN3Q9UHW5 284 aaPredicted RBP17.25■□□□□ 0.35
MMP9-201ENST00000372330 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.24■□□□□ 0.35
MMP9-201ENST00000372330 TRBV4-1A0A0J9YWV2 114 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 ZNF840PA6NDX5 716 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 ANKRD66B4E2M5 251 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 PRODHO43272 600 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 LRRTM2O43300 516 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 F11P03951 625 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 ETFAP13804 333 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 SGSHP51688 502 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 PITPNAQ00169 270 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 ZNF177Q13360 481 aaPredicted RBP17.24■□□□□ 0.35
MMP9-201ENST00000372330 DYRK1AQ13627 763 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 GPNMBQ14956 572 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 ZSWIM7Q19AV6 140 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 ARMC12Q5T9G4 340 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 METTL11BQ5VVY1 283 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 TRIM40Q6P9F5 258 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 ANGPTL8Q6UXH0 198 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 SIAH3Q8IW03 269 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 OXR1Q8N573 874 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 TET1Q8NFU7 2136 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 OR5M9Q8NGP3 310 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 C11orf49Q9H6J7 331 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 NPDC1Q9NQX5 325 aaPredicted RBP17.24■□□□□ 0.35
MMP9-201ENST00000372330 RHCGQ9UBD6 479 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 LRFN2Q9ULH4 789 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 TRAV20A0A0B4J274 112 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 COCHO43405 550 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 GATCO43716 136 aaKnown RBP17.24■□□□□ 0.35
MMP9-201ENST00000372330 RNGTTO60942 597 aaKnown RBP17.24■□□□□ 0.35
MMP9-201ENST00000372330 KDM4BO94953 1096 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 HPXP02790 462 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 IGFBP1P08833 259 aaPredicted RBP17.24■□□□□ 0.35
MMP9-201ENST00000372330 GABRA1P14867 456 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 PPP3CBP16298 524 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 POU3F2P20265 443 aaPredicted RBP17.24■□□□□ 0.35
MMP9-201ENST00000372330 MMP15P51511 669 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 ZXDBP98169 803 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 HFEQ30201 348 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 OTOP2Q7RTS6 562 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 TRMT11Q7Z4G4 463 aaKnown RBP17.24■□□□□ 0.35
MMP9-201ENST00000372330 SLC30A8Q8IWU4 369 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 SAMD12Q8N8I0 201 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 FAM71CQ8NEG0 241 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 ZDHHC1Q8WTX9 485 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 PLD4Q96BZ4 506 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 RNFT2Q96EX2 444 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 SEC14L3Q9UDX4 400 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 TINAGQ9UJW2 476 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 CA5BQ9Y2D0 317 aa17.24■□□□□ 0.35
MMP9-201ENST00000372330 FNDC3AQ9Y2H6 1198 aaKnown RBP17.24■□□□□ 0.35
MMP9-201ENST00000372330 AGAP14A8MT82 685 aa17.23■□□□□ 0.35
MMP9-201ENST00000372330 RNASET2O00584 256 aaKnown RBP17.23■□□□□ 0.35
MMP9-201ENST00000372330 ADAM12O43184 909 aa17.23■□□□□ 0.35
MMP9-201ENST00000372330 TSPAN3O60637 253 aa17.23■□□□□ 0.35
MMP9-201ENST00000372330 STC2O76061 302 aa17.23■□□□□ 0.35
MMP9-201ENST00000372330 EIF4EP06730 217 aaKnown RBP17.23■□□□□ 0.35
MMP9-201ENST00000372330 FABP1P07148 127 aa17.23■□□□□ 0.35
MMP9-201ENST00000372330 LIMS3P0CW19 117 aa17.23■□□□□ 0.35
MMP9-201ENST00000372330 LIMS4P0CW20 117 aa17.23■□□□□ 0.35
MMP9-201ENST00000372330 CORO1AP31146 461 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms