RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SELPLGQ14242 412 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 CPSF6Q16630 551 aaKnown RBP eCLIP9.71□□□□□ -0.86
COL5A1-202ENST00000371820 HIST2H2ACQ16777 129 aaPredicted RBP9.71□□□□□ -0.86
COL5A1-202ENST00000371820 PHKG1Q16816 387 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 HKDC1Q2TB90 917 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 PGS1Q32NB8 556 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 SPIN4Q56A73 249 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 SYT6Q5T7P8 510 aaPredicted RBP9.71□□□□□ -0.86
COL5A1-202ENST00000371820 KDM4DQ6B0I6 523 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 HIST2H2AA3Q6FI13 130 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 XAF1Q6GPH4 301 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 ISLR2Q6UXK2 745 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 PRSS48Q7RTY5 328 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 CAMKMTQ7Z624 323 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 PARP8Q8N3A8 854 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 TMCO5AQ8N6Q1 288 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 OR56A3Q8NH54 315 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.71□□□□□ -0.86
COL5A1-202ENST00000371820 UBE2E3Q969T4 207 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 PNPLA2Q96AD5 504 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 MTERF3Q96E29 417 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 MMABQ96EY8 250 aaPredicted RBP9.71□□□□□ -0.86
COL5A1-202ENST00000371820 PANX1Q96RD7 426 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 DCUN1D5Q9BTE7 237 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 YIPF2Q9BWQ6 316 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 LHPPQ9H008 270 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 ATG10Q9H0Y0 220 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 SLAMF7Q9NQ25 335 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 TRPC4Q9UBN4 977 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 FBXL4Q9UKA2 621 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 PAIP2BQ9ULR5 123 aaKnown RBP9.71□□□□□ -0.86
COL5A1-202ENST00000371820 MAP4K5Q9Y4K4 846 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 HS3ST3B1Q9Y662 390 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 UNC79Q9P2D8 2635 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 PCM1Q15154 2024 aa9.71□□□□□ -0.86
COL5A1-202ENST00000371820 UTP20O75691 2785 aaKnown RBP9.7□□□□□ -0.86
COL5A1-202ENST00000371820 TEX15Q9BXT5 2789 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 FER1L5A0AVI2 2057 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 NBPF19A0A087WUL8 3843 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 SAGE2PA6NJ88 616 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 MAGEB17A8MXT2 336 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 ADAMDEC1O15204 470 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 AGFG2O95081 481 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 GABARAPO95166 117 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 NSA2O95478 260 aaKnown RBP9.7□□□□□ -0.86
COL5A1-202ENST00000371820 HPP00738 406 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 HEXBP07686 556 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 PCNAP12004 261 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 EFNA1P20827 205 aaPredicted RBP9.7□□□□□ -0.86
COL5A1-202ENST00000371820 ELK4P28324 431 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 EMP2P54851 167 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 HMGCS1Q01581 520 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 ACSM2AQ08AH3 577 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 PTGR1Q14914 329 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 NPTX1Q15818 432 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 MEP1AQ16819 746 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 SGO1Q5FBB7 561 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 FBXO48Q5FWF7 155 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 FGD3Q5JSP0 725 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 TOR1AIP1Q5JTV8 583 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 FHL5Q5TD97 284 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 ACSM2BQ68CK6 577 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 ENPP6Q6UWR7 440 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 IGFL3Q6UXB1 125 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 DCDC5Q6ZRR9 648 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 ASPGQ86U10 573 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 LACC1Q8IV20 430 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 P3H2Q8IVL5 708 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 ZADH2Q8N4Q0 377 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 RNF217Q8TC41 542 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 PHF10Q8WUB8 498 aaKnown RBP9.7□□□□□ -0.86
COL5A1-202ENST00000371820 MBOAT4Q96T53 435 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 TBCDQ9BTW9 1192 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 FUNDC2Q9BWH2 189 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 ACPTQ9BZG2 426 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 AMBRA1Q9C0C7 1298 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 BHLHE41Q9C0J9 482 aaPredicted RBP9.7□□□□□ -0.86
COL5A1-202ENST00000371820 TGIF2Q9GZN2 237 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 CCDC90BQ9GZT6 254 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 RACGAP1Q9H0H5 632 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 OCEL1Q9H607 264 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 LIN28AQ9H9Z2 209 aaKnown RBP9.7□□□□□ -0.86
COL5A1-202ENST00000371820 SMURF2Q9HAU4 748 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 SLC25A37Q9NYZ2 338 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 KIF17Q9P2E2 1029 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 DYRK1BQ9Y463 629 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 PCSK5Q92824 1860 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 SPTBP11277 2137 aa9.7□□□□□ -0.86
COL5A1-202ENST00000371820 A0A0A6YYC8 382 aaPredicted RBP9.69□□□□□ -0.86
COL5A1-202ENST00000371820 NSG1A0A0A6YYJ2 146 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 TRBC2A0A5B9 178 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 URADA6NGE7 173 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 I3L1I5 382 aaPredicted RBP9.69□□□□□ -0.86
COL5A1-202ENST00000371820 SOCS6O14544 535 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 FFAR3O14843 346 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 GPR42O15529 346 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 BCAS1O75363 584 aaPredicted RBP9.69□□□□□ -0.86
COL5A1-202ENST00000371820 SULT1C4O75897 302 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 MED26O95402 600 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 CLIC3O95833 236 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms