RNA–Protein interactions for RNA: ENST00000371558.6

UBE2A-202, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2A, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-202ENST00000371558 PCDHGB3Q9Y5G1 929 aa13.36□□□□□ -0.27
UBE2A-202ENST00000371558 CLOCKO15516 846 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 CDK4P11802 303 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 CD247P20963 164 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 GCKP35557 465 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 PPP1R8Q12972 351 aaKnown RBP13.35□□□□□ -0.27
UBE2A-202ENST00000371558 ELOAQ14241 798 aaKnown RBP13.35□□□□□ -0.27
UBE2A-202ENST00000371558 NCF4Q15080 339 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 GPR68Q15743 365 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 ATP6AP1Q15904 470 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 IFI44LQ53G44 452 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 TYW3Q6IPR3 259 aaKnown RBP13.35□□□□□ -0.27
UBE2A-202ENST00000371558 TIPARPQ7Z3E1 657 aaKnown RBP13.35□□□□□ -0.27
UBE2A-202ENST00000371558 GPR32P1Q8NGA4 272 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 EME1Q96AY2 570 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 GAL3ST4Q96RP7 486 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 CIB1Q99828 191 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 NUDT9Q9BW91 350 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 BTBD2Q9BX70 525 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 IL1RAPQ9NPH3 570 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 PRODH2Q9UF12 536 aa13.35□□□□□ -0.27
UBE2A-202ENST00000371558 PTRH2Q9Y3E5 179 aaKnown RBP13.35□□□□□ -0.27
UBE2A-202ENST00000371558 NPIPA5A0A0B4J1W7 369 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 NPIPA7E9PJI5 369 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 DLL1O00548 723 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 GNGT2O14610 69 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 DEAF1O75398 565 aaPredicted RBP13.34□□□□□ -0.27
UBE2A-202ENST00000371558 DKK1O94907 266 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 IGKV3-11P04433 115 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 ALPPP05187 535 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 FESP07332 822 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 CCNYL3P0C7X3 344 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 NPIPA8P0DM63 369 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 CT45A8P0DMV1 189 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 CT45A9P0DMV2 189 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 ETS2P15036 469 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 MAGEA2P43356 314 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 CT45A2Q5DJT8 189 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 OGFRL1Q5TC84 451 aaPredicted RBP13.34□□□□□ -0.27
UBE2A-202ENST00000371558 TMEM164Q5U3C3 297 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 C6orf15Q6UXA7 325 aaPredicted RBP13.34□□□□□ -0.27
UBE2A-202ENST00000371558 ZNF517Q6ZMY9 492 aaPredicted RBP13.34□□□□□ -0.27
UBE2A-202ENST00000371558 VRK2Q86Y07 508 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 CENPNQ96H22 339 aaPredicted RBP13.34□□□□□ -0.27
UBE2A-202ENST00000371558 KLHL4Q9C0H6 718 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 WDR54Q9H977 334 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 COPS7AQ9UBW8 275 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 BAG5Q9UL15 447 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 OR10H1Q9Y4A9 318 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 DCHS1Q96JQ0 3298 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 PTPRBP23467 1997 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 DSPPQ9NZW4 1301 aa13.34□□□□□ -0.27
UBE2A-202ENST00000371558 PRAMEF25A6NGN4 478 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 SEC24DO94855 1032 aaPredicted RBP13.33□□□□□ -0.27
UBE2A-202ENST00000371558 KCNK2O95069 426 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 TNFSF15O95150 251 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 YAP1P46937 504 aaKnown RBP13.33□□□□□ -0.27
UBE2A-202ENST00000371558 KCNJ5P48544 419 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 RNF144AP50876 292 aaPredicted RBP13.33□□□□□ -0.27
UBE2A-202ENST00000371558 ZNF311Q5JNZ3 666 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 PRAMEF8Q5VWM4 474 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 PRAMEF7Q5VXH5 474 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 PAPD4Q6PIY7 484 aaKnown RBP13.33□□□□□ -0.27
UBE2A-202ENST00000371558 ZAR1Q86SH2 424 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 KBTBD2Q8IY47 623 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 CHDHQ8NE62 594 aaPredicted RBP13.33□□□□□ -0.27
UBE2A-202ENST00000371558 OR1N1Q8NGS0 311 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 VANGL1Q8TAA9 524 aaPredicted RBP13.33□□□□□ -0.27
UBE2A-202ENST00000371558 PROX1Q92786 737 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 HOXB13Q92826 284 aaPredicted RBP13.33□□□□□ -0.27
UBE2A-202ENST00000371558 C7orf34Q96L11 122 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 ART5Q96L15 291 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 SLC46A1Q96NT5 459 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 BDH2Q9BUT1 245 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 SPATA5L1Q9BVQ7 753 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 ZNF350Q9GZX5 532 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 Q9N2J8 555 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 NXT1Q9UKK6 140 aaKnown RBP13.33□□□□□ -0.27
UBE2A-202ENST00000371558 PADI1Q9ULC6 663 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 DTNAQ9Y4J8 743 aa13.33□□□□□ -0.27
UBE2A-202ENST00000371558 CENPVL1A0A0U1RR11 272 aa13.33□□□□□ -0.28
UBE2A-202ENST00000371558 SYNDIG1LA6NDD5 238 aa13.33□□□□□ -0.28
UBE2A-202ENST00000371558 PDLIM1O00151 329 aa13.33□□□□□ -0.28
UBE2A-202ENST00000371558 BRINP1O60477 761 aa13.33□□□□□ -0.28
UBE2A-202ENST00000371558 STX11O75558 287 aa13.33□□□□□ -0.28
UBE2A-202ENST00000371558 DLGAP3O95886 979 aa13.33□□□□□ -0.28
UBE2A-202ENST00000371558 PABPC4LP0CB38 370 aaKnown RBP13.33□□□□□ -0.28
UBE2A-202ENST00000371558 ZNF23P17027 643 aa13.33□□□□□ -0.28
UBE2A-202ENST00000371558 CSRP1P21291 193 aaKnown RBP13.33□□□□□ -0.28
UBE2A-202ENST00000371558 NOVA1P51513 510 aaKnown RBP13.33□□□□□ -0.28
UBE2A-202ENST00000371558 IST1P53990 364 aa13.33□□□□□ -0.28
UBE2A-202ENST00000371558 NHLH1Q02575 133 aa13.33□□□□□ -0.28
UBE2A-202ENST00000371558 PUM1Q14671 1186 aaKnown RBP eCLIP13.33□□□□□ -0.28
UBE2A-202ENST00000371558 IZUMO2Q6UXV1 221 aa13.33□□□□□ -0.28
UBE2A-202ENST00000371558 CPEB2Q7Z5Q1 589 aaKnown RBP13.33□□□□□ -0.28
UBE2A-202ENST00000371558 COMTD1Q86VU5 262 aa13.33□□□□□ -0.28
UBE2A-202ENST00000371558 C9orf40Q8IXQ3 194 aa13.33□□□□□ -0.28
UBE2A-202ENST00000371558 GALNT4Q8N4A0 578 aa13.33□□□□□ -0.28
UBE2A-202ENST00000371558 MORN4Q8NDC4 146 aa13.33□□□□□ -0.28
UBE2A-202ENST00000371558 OR52P1PQ8NH57 321 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms