RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 HSD11B2P80365 405 aa13.91□□□□□ -0.18
NDC1-201ENST00000371429 NKAPLQ5M9Q1 402 aa13.91□□□□□ -0.18
NDC1-201ENST00000371429 ACBD7Q8N6N7 88 aa13.91□□□□□ -0.18
NDC1-201ENST00000371429 OR5D16Q8NGK9 328 aa13.91□□□□□ -0.18
NDC1-201ENST00000371429 OR6C1Q96RD1 312 aa13.91□□□□□ -0.18
NDC1-201ENST00000371429 C2orf42Q9NWW7 574 aa13.91□□□□□ -0.18
NDC1-201ENST00000371429 PTBP2Q9UKA9 531 aaKnown RBP13.91□□□□□ -0.18
NDC1-201ENST00000371429 PCDHGB6Q9Y5F9 930 aa13.91□□□□□ -0.18
NDC1-201ENST00000371429 BLACEA4D250 179 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 H0YAE9 185 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 CKMT1AP12532 417 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 ICAM2P13598 275 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 TNFRSF1BP20333 461 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 EPHA4P54764 986 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 HERV-K104P61576 105 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 NADK2Q4G0N4 442 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 GXYLT1Q4G148 440 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 ZNF773Q6PK81 442 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 PAQR7Q86WK9 346 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 MAFAQ8NHW3 353 aaPredicted RBP13.9□□□□□ -0.18
NDC1-201ENST00000371429 CNIH3Q8TBE1 160 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 LINC01599Q8WXQ3 324 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 CDH20Q9HBT6 801 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 TOGARAM1Q9Y4F4 1720 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 H0YJX3 145 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 HPRP00739 348 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 GPR18Q14330 331 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 PDSS2Q86YH6 399 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 METTL25Q8N6Q8 603 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 BOLLQ8N9W6 283 aaKnown RBP13.9□□□□□ -0.18
NDC1-201ENST00000371429 WDR20Q8TBZ3 569 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 HDAC2Q92769 488 aaKnown RBP13.9□□□□□ -0.18
NDC1-201ENST00000371429 CNN2Q99439 309 aaKnown RBP13.9□□□□□ -0.18
NDC1-201ENST00000371429 TXLNGYQ9BZA5 131 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 SH3BGRL2Q9UJC5 107 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 ZNF221Q9UK13 617 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 MGAT4AQ9UM21 535 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 NPIPA5A0A0B4J1W7 369 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 GABRR3A8MPY1 467 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 NPIPA7E9PJI5 369 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 L7N2F9 121 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 NDUFB2O95178 105 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 NPIPA8P0DM63 369 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 CPMP14384 443 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 VAMP1P23763 118 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 VAMP2P63027 116 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 HSD17B12Q53GQ0 312 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 PRAMEF17Q5VTA0 474 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 TIGD4Q8IY51 512 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 OR51Q1Q8NH59 317 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 ACOT12Q8WYK0 555 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 KLHL21Q9UJP4 597 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 TEX13DA0A0J9YY54 714 aaPredicted RBP13.9□□□□□ -0.18
NDC1-201ENST00000371429 GGT3PA6NGU5 568 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 JRKO75564 520 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 PLATP00750 562 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 TUBA1BP68363 451 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 TUBA4AP68366 448 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 PIN1Q13526 163 aaPredicted RBP13.9□□□□□ -0.18
NDC1-201ENST00000371429 TUBA3CQ13748 450 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 MRPL58Q14197 206 aaKnown RBP13.9□□□□□ -0.18
NDC1-201ENST00000371429 TAZQ16635 292 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 PAGE3Q5JUK9 113 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 TUBA1AQ71U36 451 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 GOLM1Q8NBJ4 401 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 MFSD9Q8NBP5 474 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 TUBA8Q9NY65 449 aaPredicted RBP13.9□□□□□ -0.18
NDC1-201ENST00000371429 NRAPQ86VF7 1730 aa13.9□□□□□ -0.18
NDC1-201ENST00000371429 NME4O00746 187 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 ANKRD28O15084 1053 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 IRF2P14316 349 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 CD46P15529 392 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 ZNF16P17020 682 aaPredicted RBP13.89□□□□□ -0.19
NDC1-201ENST00000371429 GRK5P34947 590 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 DCST2Q5T1A1 773 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 BCL7CQ8WUZ0 217 aaPredicted RBP13.89□□□□□ -0.19
NDC1-201ENST00000371429 SPRYD4Q8WW59 207 aaPredicted RBP13.89□□□□□ -0.19
NDC1-201ENST00000371429 CDS1Q92903 461 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 TMEM45AQ9NWC5 275 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 IL20RAQ9UHF4 553 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 SLC35A3Q9Y2D2 325 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 PCDHA9Q9Y5H5 950 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 HEMK1Q9Y5R4 338 aaPredicted RBP13.89□□□□□ -0.19
NDC1-201ENST00000371429 CACNA1SQ13698 1873 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 LOC100509620A0A075B734 347 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 CDC14CA4D256 554 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 SCGNO76038 276 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 ZNF35P13682 527 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 ETV4P43268 484 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 TMEM201Q5SNT2 666 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 IL20RBQ6UXL0 311 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 NETO1Q8TDF5 533 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 METTL8Q9H825 291 aaKnown RBP13.89□□□□□ -0.19
NDC1-201ENST00000371429 TMEM265A0A087WTH1 108 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 TRBV2A0A0J9YWF9 115 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 CCRL2O00421 344 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 FRS3O43559 492 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 RASAL1O95294 804 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 IGFBP6P24592 240 aaPredicted RBP13.89□□□□□ -0.19
NDC1-201ENST00000371429 DCDP81605 110 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms