RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 NELFEP18615 380 aaKnown RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 ACP1P24666 158 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 CERS1P27544 350 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 CASRP41180 1078 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 RAP1GDS1P52306 607 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 WNT3P56703 355 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 C21orf58P58505 322 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 TAS2R50P59544 299 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 STX1BP61266 288 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 HSD11B2P80365 405 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 SLC25A3Q00325 362 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 RGS1Q08116 209 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 C2orf80Q0P641 193 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 SLC14A1Q13336 389 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 TMED1Q13445 227 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 GPR68Q15743 365 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 PRICKLE4Q2TBC4 344 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 PAGE3Q5JUK9 113 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 SPANXN4Q5MJ08 99 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 CCNYL2Q5T2Q4 361 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ATPAF1Q5TC12 328 aaPredicted RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 PRAMEF17Q5VTA0 474 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 AP1ARQ63HQ0 302 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ANKRD26P1Q6NSI1 321 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 PLBD1Q6P4A8 553 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 PIP4P1Q86T03 277 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 NAXDQ8IW45 347 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 KIF2BQ8N4N8 673 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 CSNK1A1LQ8N752 337 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ACOT4Q8N9L9 421 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 CAMKVQ8NCB2 501 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 RBM15BQ8NDT2 890 aaKnown RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 OR4D9Q8NGE8 314 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 OR1L3Q8NH93 324 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 CDC26Q8NHZ8 85 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ZCCHC10Q8TBK6 192 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 CMTM5Q96DZ9 223 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 SPDL1Q96EA4 605 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 MAPKAP1Q9BPZ7 522 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 MESP1Q9BRJ9 268 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 TBCDQ9BTW9 1192 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 TUBB6Q9BUF5 446 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 DPY30Q9C005 99 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ZNF768Q9H5H4 540 aaKnown RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 GPR35Q9HC97 309 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 PDE7BQ9NP56 450 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 MYNNQ9NPC7 610 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 TMEM9BQ9NQ34 198 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 TMEM45AQ9NWC5 275 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 SOHLH2Q9NX45 425 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 TEX10Q9NXF1 929 aaPredicted RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 ETAA1Q9NY74 926 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 NCDNQ9UBB6 729 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ATP6V1HQ9UI12 483 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 RCE1Q9Y256 329 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ATG4BQ9Y4P1 393 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 SEC16AO15027 2179 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 NUP214P35658 2090 aaPredicted RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 DMXL1Q9Y485 3027 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 COL27A1Q8IZC6 1860 aaPredicted RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 A0A1W2PP18 115 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 OR2W5A6NFC9 320 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 ZNF860A6NHJ4 632 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 FXYD1O00168 92 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 SCAMP2O15127 329 aaKnown RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 PGRMC2O15173 223 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 TOX3O15405 576 aaPredicted RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 LRP3O75074 770 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 PRKRAO75569 313 aaKnown RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 KIAA0754O94854 1291 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 SCELO95171 688 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 GASTP01350 101 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 IL3P08700 152 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 FAM58BPP0C7Q3 252 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 SLC35G6P0C7Q6 338 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 ITGAXP20702 1163 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 EFNA1P20827 205 aaPredicted RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 PRPS1L1P21108 318 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 HIST1H1TP22492 207 aaPredicted RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 CALB2P22676 271 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 PTPN4P29074 926 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 SSR2P43308 183 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 KIR2DL3P43628 341 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 PDX1P52945 283 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 ARFIP1P53367 373 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 MAPK12P53778 367 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 CLDN6P56747 220 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 STXBP1P61764 594 aaKnown RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 OLR1P78380 273 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 PLIN5Q00G26 463 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 ZFP36L1Q07352 338 aaKnown RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 ZNF763Q0D2J5 394 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 SLAMF1Q13291 335 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 PDE7AQ13946 482 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 RCAN2Q14206 197 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 FAM174BQ3ZCQ3 159 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 DEFB134Q4QY38 66 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 TIGD2Q4W5G0 525 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 MANEAQ5SRI9 462 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 ZNF362Q5T0B9 420 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms