RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 SHFQ7M4L6 423 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 TMEM173Q86WV6 379 aaPredicted RBP18.6■□□□□ 0.57
LMO4-202ENST00000370544 TIGD4Q8IY51 512 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 DTX3Q8N9I9 347 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 NEDD4LQ96PU5 975 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 DPH1Q9BZG8 443 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 ZNF700Q9H0M5 742 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 STARD5Q9NSY2 213 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 GMEB1Q9Y692 573 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 ANTXRLA6NF34 631 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 C1orf105O95561 183 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 GKN3PP0CG01 181 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 UGT2B10P36537 528 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 MAGEA2P43356 314 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 POGLUT1Q8NBL1 392 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 SUN5Q8TC36 379 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 ATOH8Q96SQ7 321 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 PREBQ9HCU5 417 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 RIMS3Q9UJD0 308 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 RBMS1P29558 406 aaKnown RBP18.6■□□□□ 0.57
LMO4-202ENST00000370544 DEFA5Q01523 94 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 RUNDC3AQ59EK9 446 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 TANKQ92844 425 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 SLC30A3Q99726 388 aa18.6■□□□□ 0.57
LMO4-202ENST00000370544 DDX60Q8IY21 1712 aaKnown RBP18.59■□□□□ 0.57
LMO4-202ENST00000370544 A0A0A6YYC8 382 aaPredicted RBP18.59■□□□□ 0.57
LMO4-202ENST00000370544 GABRR3A8MPY1 467 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 I3L1I5 382 aaPredicted RBP18.59■□□□□ 0.57
LMO4-202ENST00000370544 PPP6CO00743 305 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 OR7A10O76100 309 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 MAS1P04201 325 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 MAP4K2Q12851 820 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 ZNF791Q3KP31 576 aaPredicted RBP18.59■□□□□ 0.57
LMO4-202ENST00000370544 METTL25Q8N6Q8 603 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 ZNF611Q8N823 705 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 DENND6BQ8NEG7 585 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 MACROD1Q9BQ69 325 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 ZNF471Q9BX82 626 aaPredicted RBP18.59■□□□□ 0.57
LMO4-202ENST00000370544 DCAF13Q9NV06 445 aaKnown RBP18.59■□□□□ 0.57
LMO4-202ENST00000370544 GPR45Q9Y5Y3 372 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 HCFC2Q9Y5Z7 792 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 A0A1B0GVC2 190 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 ISPDA4D126 451 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 CD3GP09693 182 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 T-ENOLP0DO92 83 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 GGT2P36268 569 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 MAP2K3P46734 347 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 GJA8P48165 433 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 FAM26DQ5JW98 314 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 XKRXQ6PP77 449 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 VWA5B2Q8N398 1253 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 TMEM151AQ8N4L1 468 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 MS4A15Q8N5U1 240 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 OR5D16Q8NGK9 328 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 MROH6A6NGR9 719 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 TSPAN4O14817 238 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 PABPC4LP0CB38 370 aaKnown RBP18.59■□□□□ 0.57
LMO4-202ENST00000370544 RPL19P84098 196 aaKnown RBP18.59■□□□□ 0.57
LMO4-202ENST00000370544 ZFAND2BQ8WV99 257 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 ASB11Q8WXH4 323 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 HOXB13Q92826 284 aaPredicted RBP18.59■□□□□ 0.57
LMO4-202ENST00000370544 C3orf30Q96M34 536 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 TIMM29Q9BSF4 260 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 ENY2Q9NPA8 101 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 HEBP1Q9NRV9 189 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 CNIH4Q9P003 139 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 ARNTLO00327 626 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 PRLP01236 227 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 CGB2Q6NT52 195 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 UEVLDQ8IX04 471 aa18.59■□□□□ 0.57
LMO4-202ENST00000370544 A8MVJ9 347 aa18.58■□□□□ 0.57
LMO4-202ENST00000370544 UCHL1P09936 223 aa18.58■□□□□ 0.57
LMO4-202ENST00000370544 MALLQ13021 153 aa18.58■□□□□ 0.57
LMO4-202ENST00000370544 BCL2L15Q5TBC7 163 aa18.58■□□□□ 0.57
LMO4-202ENST00000370544 ZNF480Q8WV37 535 aa18.58■□□□□ 0.57
LMO4-202ENST00000370544 ZNF300Q96RE9 604 aaPredicted RBP18.58■□□□□ 0.57
LMO4-202ENST00000370544 ANKRD60Q9BZ19 345 aa18.58■□□□□ 0.57
LMO4-202ENST00000370544 C2orf42Q9NWW7 574 aa18.58■□□□□ 0.57
LMO4-202ENST00000370544 NDUFB2O95178 105 aa18.58■□□□□ 0.57
LMO4-202ENST00000370544 NUDT1P36639 197 aa18.58■□□□□ 0.57
LMO4-202ENST00000370544 CST9Q5W186 159 aa18.58■□□□□ 0.57
LMO4-202ENST00000370544 NLGN4XQ8N0W4 816 aa18.58■□□□□ 0.57
LMO4-202ENST00000370544 METTL2AQ96IZ6 378 aaKnown RBP18.58■□□□□ 0.57
LMO4-202ENST00000370544 BIRC8Q96P09 236 aa18.58■□□□□ 0.57
LMO4-202ENST00000370544 SLC6A7Q99884 636 aa18.58■□□□□ 0.57
LMO4-202ENST00000370544 CASC3O15234 703 aaKnown RBP18.58■□□□□ 0.56
LMO4-202ENST00000370544 ZNF806P0C7X5 589 aa18.58■□□□□ 0.56
LMO4-202ENST00000370544 SOX9P48436 509 aa18.58■□□□□ 0.56
LMO4-202ENST00000370544 PXNP49023 591 aaPredicted RBP18.58■□□□□ 0.56
LMO4-202ENST00000370544 PRPS1P60891 318 aa18.58■□□□□ 0.56
LMO4-202ENST00000370544 DCDC5Q6ZRR9 648 aa18.58■□□□□ 0.56
LMO4-202ENST00000370544 ANKK1Q8NFD2 765 aa18.58■□□□□ 0.56
LMO4-202ENST00000370544 HSPB11Q9Y547 144 aa18.58■□□□□ 0.56
LMO4-202ENST00000370544 FAM227AF5H4B4 570 aa18.58■□□□□ 0.56
LMO4-202ENST00000370544 GK3PQ14409 553 aa18.58■□□□□ 0.56
LMO4-202ENST00000370544 PDLIM5Q96HC4 596 aaKnown RBP18.58■□□□□ 0.56
LMO4-202ENST00000370544 TREM1Q9NP99 234 aa18.58■□□□□ 0.56
LMO4-202ENST00000370544 A8MV72 311 aaPredicted RBP18.57■□□□□ 0.56
LMO4-202ENST00000370544 HIDE1A8MVS5 230 aa18.57■□□□□ 0.56
LMO4-202ENST00000370544 TBRG1Q3YBR2 411 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms