RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 NT5EP21589 574 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 FBLP22087 321 aaKnown RBP11.25□□□□□ -0.61
USF1-203ENST00000368021 AQP1P29972 269 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 SLC5A2P31639 672 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 CSTF2P33240 577 aaKnown RBP eCLIP11.25□□□□□ -0.61
USF1-203ENST00000368021 OR1D4P47884 311 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 IL11RAQ14626 422 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 MAPK11Q15759 364 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 TRMT12Q53H54 448 aaKnown RBP11.25□□□□□ -0.61
USF1-203ENST00000368021 ZNF362Q5T0B9 420 aaPredicted RBP11.25□□□□□ -0.61
USF1-203ENST00000368021 PHF19Q5T6S3 580 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 PRAMEF17Q5VTA0 474 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 PPP4R4Q6NUP7 873 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 MFSD12Q6NUT3 480 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 CDC73Q6P1J9 531 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 QSOX2Q6ZRP7 698 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 AMIGO2Q86SJ2 522 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 OR5D16Q8NGK9 328 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 XAGE5Q8WWM1 108 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 RAB8BQ92930 207 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 HSH2DQ96JZ2 352 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 ZNF578Q96N58 590 aaPredicted RBP11.25□□□□□ -0.61
USF1-203ENST00000368021 ALOXE3Q9BYJ1 711 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 RBCK1Q9BYM8 510 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 SEMA6AQ9H2E6 1030 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 CXorf21Q9HAI6 301 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 C12orf10Q9HB07 376 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 BCL2L10Q9HD36 194 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 TRPC4Q9UBN4 977 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 LIPT1Q9Y234 373 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 PTPRBP23467 1997 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 SYNDIG1LA6NDD5 238 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 TMEM229AB2RXF0 380 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 TGFBR3LH3BV60 316 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 CSO75390 466 aaKnown RBP11.25□□□□□ -0.61
USF1-203ENST00000368021 CDC123O75794 336 aaPredicted RBP11.25□□□□□ -0.61
USF1-203ENST00000368021 SOX30O94993 753 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 PGM3O95394 542 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 STT3AP46977 705 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 ALDH3B2P48448 385 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 CRISP3P54108 245 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 BTG2P78543 158 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 FOXK2Q01167 660 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 LRRC36Q1X8D7 754 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 GRAMD1BQ3KR37 738 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 EXOSC6Q5RKV6 272 aaKnown RBP11.25□□□□□ -0.61
USF1-203ENST00000368021 PIWIL3Q7Z3Z3 882 aaKnown RBP11.25□□□□□ -0.61
USF1-203ENST00000368021 B3GNT8Q7Z7M8 397 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 GALNT10Q86SR1 603 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 PPP1R3BQ86XI6 285 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 GALNT12Q8IXK2 581 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 VWA5B2Q8N398 1253 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 ESX1Q8N693 406 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 AGBL5Q8NDL9 886 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 RIT1Q92963 219 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 TAMM41Q96BW9 452 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 C16orf58Q96GQ5 468 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 OR7D2Q96RA2 312 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 ZNF607Q96SK3 696 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 TREX2Q9BQ50 279 aaPredicted RBP11.25□□□□□ -0.61
USF1-203ENST00000368021 BTBD2Q9BX70 525 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 MKKSQ9NPJ1 570 aaPredicted RBP11.25□□□□□ -0.61
USF1-203ENST00000368021 C8orf4Q9NR00 106 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 DNAJB9Q9UBS3 223 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 ZMAT5Q9UDW3 170 aaKnown RBP11.25□□□□□ -0.61
USF1-203ENST00000368021 ZNF639Q9UID6 485 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 DTNAQ9Y4J8 743 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 ACACBO00763 2458 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 PRAMEF27A3QJZ7 478 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 SLC28A2O43868 658 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 NOL3O60936 208 aaKnown RBP11.24□□□□□ -0.61
USF1-203ENST00000368021 ONECUT2O95948 504 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 CT62P0C5K7 136 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 NR2F1P10589 423 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 FGF5P12034 268 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 KCNJ10P78508 379 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 ERV3-1Q14264 604 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 ATAD3BQ5T9A4 648 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 ARHGAP40Q5TG30 622 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 VTCN1Q7Z7D3 282 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 ZDHHC21Q8IVQ6 265 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 CDRT4Q8N9R6 151 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 BBS10Q8TAM1 723 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 SUN5Q8TC36 379 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 ADAMTS15Q8TE58 950 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 PLEKHA8Q96JA3 519 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 DGAT2Q96PD7 388 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 TRNT1Q96Q11 434 aaKnown RBP11.24□□□□□ -0.61
USF1-203ENST00000368021 SLC7A5P2Q9GIP4 190 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 TGIF2Q9GZN2 237 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 ANKRA2Q9H9E1 313 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 EQTNQ9NQ60 294 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 DUSP22Q9NRW4 184 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 EXD2Q9NVH0 621 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 CALML5Q9NZT1 146 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 PADI2Q9Y2J8 665 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 MSRB2Q9Y3D2 182 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 IGF2RP11717 2491 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 NUP210LQ5VU65 1888 aa11.24□□□□□ -0.61
USF1-203ENST00000368021 CCDC88CQ9P219 2028 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms