RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 ZBTB11O95625 1053 aaPredicted RBP13.11□□□□□ -0.31
USF1-202ENST00000368020 CSTF2P33240 577 aaKnown RBP eCLIP13.11□□□□□ -0.31
USF1-202ENST00000368020 ARF3P61204 181 aaPredicted RBP13.11□□□□□ -0.31
USF1-202ENST00000368020 VBP1P61758 197 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 TMEM31Q5JXX7 168 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 MFSD4BQ5TF39 518 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 TMEM236Q5W0B7 351 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 TAF8Q7Z7C8 310 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 PARGQ86W56 976 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 SLC22A18ASQ8N1D0 253 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 TMEM105Q8N8V8 129 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 DTWD2Q8NBA8 298 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 OR7G2Q8NG99 324 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 OR52P1PQ8NH57 321 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 NDNFQ8TB73 568 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 TEX47Q8TBZ9 253 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 KAT2AQ92830 837 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 FCRL4Q96PJ5 515 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 CCDC3Q9BQI4 270 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 RSPO3Q9BXY4 272 aaPredicted RBP13.11□□□□□ -0.31
USF1-202ENST00000368020 MMP27Q9H306 513 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 C6orf106Q9H6K1 298 aaPredicted RBP13.11□□□□□ -0.31
USF1-202ENST00000368020 AMBNQ9NP70 447 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 POLE3Q9NRF9 147 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 DUSP22Q9NRW4 184 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 OSGIN1Q9UJX0 560 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 ERGIC3Q9Y282 383 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 WDR45Q9Y484 360 aa13.11□□□□□ -0.31
USF1-202ENST00000368020 OR5K3A6NET4 321 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 METTL12A8MUP2 240 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 FAM227AF5H4B4 570 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 CBFA2T3O75081 653 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 OR5F1O95221 314 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 EPPINO95925 133 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 THEGLP0DJG4 465 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 NR4A1P22736 598 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 MMP11P24347 488 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 LIPAP38571 399 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 PCYT1AP49585 367 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 RGS8P57771 180 aaPredicted RBP13.1□□□□□ -0.31
USF1-202ENST00000368020 CHRNEQ04844 493 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 TSPAN31Q12999 210 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 DUSP8Q13202 625 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 C1DQ13901 141 aaKnown RBP13.1□□□□□ -0.31
USF1-202ENST00000368020 RUNX2Q13950 521 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 DECR1Q16698 335 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 IQCHQ86VS3 1027 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 WDR5BQ86VZ2 330 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 SLC15A4Q8N697 577 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 TMCO5AQ8N6Q1 288 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 CSNK1A1LQ8N752 337 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 CDRT4Q8N9R6 151 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 PIGXQ8TBF5 258 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 ADAMTS18Q8TE60 1221 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 SLC37A2Q8TED4 501 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 DIO2Q92813 273 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 COL26A1Q96A83 441 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 SLC35A4Q96G79 324 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 TMEM80Q96HE8 168 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 SLC38A2Q96QD8 506 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 MND1Q9BWT6 205 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 SEMA6CQ9H3T2 930 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 PIGUQ9H490 435 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 CCDC59Q9P031 241 aaKnown RBP13.1□□□□□ -0.31
USF1-202ENST00000368020 SPAG17Q6Q759 2223 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 A0A1W2PPC4 97 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 M0R082 166 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 GALR3O60755 368 aaPredicted RBP13.1□□□□□ -0.31
USF1-202ENST00000368020 SOX14O95416 240 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 GPR75O95800 540 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 ALOX5P09917 674 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 GIPRP48546 466 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 RGS6P49758 472 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 CDK5Q00535 292 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 HHEXQ03014 270 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 EIF2B5Q13144 721 aaKnown RBP13.1□□□□□ -0.31
USF1-202ENST00000368020 TMED1Q13445 227 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 NR1D2Q14995 579 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 TCEA2Q15560 299 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 LTB4RQ15722 352 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 KLHL22Q53GT1 634 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 ZNF628Q5EBL2 1059 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 ARMCX4Q5H9R4 360 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 ZNF730Q6ZMV8 503 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 FRRS1Q6ZNA5 592 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 GDPGP1Q6ZNW5 385 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 RASSF6Q6ZTQ3 369 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 ZER1Q7Z7L7 766 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 C11orf74Q86VG3 221 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 RANBP3LQ86VV4 465 aaPredicted RBP13.1□□□□□ -0.31
USF1-202ENST00000368020 MAML2Q8IZL2 1156 aaPredicted RBP13.1□□□□□ -0.31
USF1-202ENST00000368020 CYP4Z2PQ8N1L4 340 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 FAM160A2Q8N612 972 aaPredicted RBP13.1□□□□□ -0.31
USF1-202ENST00000368020 MINDY2Q8NBR6 621 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 B4GALNT2Q8NHY0 566 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 ACOT11Q8WXI4 607 aaPredicted RBP13.1□□□□□ -0.31
USF1-202ENST00000368020 KLHDC7BQ96G42 594 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 DACH2Q96NX9 599 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 DCSTAMPQ9H295 470 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 AKIP1Q9NQ31 210 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms