RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 BAK1Q16611 211 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 TMEM44Q2T9K0 475 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 ZNF628Q5EBL2 1059 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 COX20Q5RI15 118 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 DCST1Q5T197 706 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 LCN1P1Q5VSP4 162 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 MZT2BQ6NZ67 158 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 C22orf39Q6P5X5 142 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 SLCO4C1Q6ZQN7 724 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 PRICKLE2Q7Z3G6 844 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 ZNF438Q7Z4V0 828 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 IQCHQ86VS3 1027 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 EID2Q8N6I1 236 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 HUS1BQ8NHY5 278 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 TMEM163Q8TC26 289 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 NEURL3Q96EH8 262 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 MTERF1Q99551 399 aaKnown RBP10.84□□□□□ -0.67
USF1-201ENST00000368019 SOSTQ9BQB4 213 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 FUZQ9BT04 418 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 ATG10Q9H0Y0 220 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 MIXL1Q9H2W2 232 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 DMRT3Q9NQL9 472 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 TXNL4BQ9NX01 149 aaKnown RBP10.84□□□□□ -0.67
USF1-201ENST00000368019 TMPRSS11EQ9UL52 423 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 GSTK1Q9Y2Q3 226 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 SNX8Q9Y5X2 465 aa10.84□□□□□ -0.67
USF1-201ENST00000368019 TBC1D3DA0A087WVF3 549 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 TBC1D3IA0A087WXS9 549 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 TBC1D3EA0A087X179 549 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 TBC1D3KA0A087X1G2 549 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 GNG14A0A1W2PPG7 69 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 TBC1D3FA6NER0 549 aaPredicted RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 FABP12A6NFH5 140 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 TBC1D3LB9A6J9 549 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 SGK494L7N484 410 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 PLRG1O43660 514 aaKnown RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 TLX3O43711 291 aaPredicted RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 ENTPD6O75354 484 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 SLC43A1O75387 559 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 ETHE1O95571 254 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 H1F0P07305 194 aaKnown RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 ADRA2AP08913 450 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 HBQ1P09105 142 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 TBC1D3HP0C7X1 549 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 NR2F6P10588 404 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 SRCP12931 536 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 ELAVL4P26378 380 aaKnown RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 IMPA1P29218 277 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 NNMTP40261 264 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 EIF2S3P41091 472 aaKnown RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 MAP2K3P46734 347 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 PRLHRP49683 370 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 GZMKP49863 264 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 XKP51811 444 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 CRISP3P54108 245 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 RPS13P62277 151 aaKnown RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 CYP4F2P78329 520 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 GALK2Q01415 458 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 ACSM1Q08AH1 577 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 TARDBPQ13148 414 aaKnown RBP eCLIP10.83□□□□□ -0.68
USF1-201ENST00000368019 SLAMF1Q13291 335 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 NAE1Q13564 534 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 PDZK1Q5T2W1 519 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 AGBL4Q5VU57 503 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 SAXO2Q658L1 398 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 TBC1D3GQ6DHY5 549 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 HIST2H2AA3Q6FI13 130 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 TBC1D3CQ6IPX1 549 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 BRAT1Q6PJG6 821 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 CD200R1LQ6Q8B3 271 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 FAM131AQ6UXB0 335 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 MRGPREQ86SM8 312 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 LAX1Q8IWV1 398 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 TBC1D3Q8IZP1 549 aaPredicted RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 SLC34A3Q8N130 599 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 CDC26Q8NHZ8 85 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 C16orf78Q8WTQ4 265 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 SKA2Q8WVK7 121 aaPredicted RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 JPH3Q8WXH2 748 aaPredicted RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 FGF11Q92914 225 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 GTPBP3Q969Y2 492 aaKnown RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 TMEM159Q96B96 161 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 NXPE2Q96DL1 559 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 KCTD7Q96MP8 289 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 FOPNLQ96NB1 174 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 OR4K3Q96R72 315 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 WRAP53Q9BUR4 548 aaKnown RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 TSSK6Q9BXA6 273 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 NLNQ9BYT8 704 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 NRSN2Q9GZP1 204 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 TAS2R16Q9NYV7 291 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 PTTG3PQ9NZH4 202 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 PLEKHB1Q9UF11 243 aaPredicted RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 TESQ9UGI8 421 aaKnown RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 ADAM30Q9UKF2 790 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 ITM2BQ9Y287 266 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 KLHL20Q9Y2M5 609 aa10.83□□□□□ -0.68
USF1-201ENST00000368019 EXOSC1Q9Y3B2 195 aaKnown RBP10.83□□□□□ -0.68
USF1-201ENST00000368019 DYRK1BQ9Y463 629 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms