RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 ACP2P11117 423 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 ESRRAP11474 423 aaPredicted RBP13.42□□□□□ -0.26
SF3B5-201ENST00000367569 LBPP18428 481 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 DRD5P21918 477 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 GDF1P27539 372 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 IL12BP29460 328 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 RNF144AP50876 292 aaPredicted RBP13.42□□□□□ -0.26
SF3B5-201ENST00000367569 SLC18A1P54219 525 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 SLC9B1Q4ZJI4 515 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 CPTPQ5TA50 214 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 TMEM198Q66K66 360 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 ANGPTL8Q6UXH0 198 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 Q6ZPB1 254 aaPredicted RBP13.42□□□□□ -0.26
SF3B5-201ENST00000367569 LARP4Q71RC2 724 aaKnown RBP eCLIP13.42□□□□□ -0.268e-11■■■■■ 36.2
SF3B5-201ENST00000367569 R3HCC1LQ7Z5L2 792 aaKnown RBP13.42□□□□□ -0.26
SF3B5-201ENST00000367569 SLC22A16Q86VW1 577 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 ANKRD46Q86W74 232 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 C17orf47Q8NEP4 570 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 NUP43Q8NFH3 380 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 DYDC1Q8WWB3 177 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 HSPBAP1Q96EW2 488 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 CHMP6Q96FZ7 201 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 RMND5BQ96G75 393 aaPredicted RBP13.42□□□□□ -0.26
SF3B5-201ENST00000367569 C16orf58Q96GQ5 468 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 OSBPL11Q9BXB4 747 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 RUBCNLQ9H714 662 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 EXO5Q9H790 373 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 CXorf36Q9H7Y0 433 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 IL1RL2Q9HB29 575 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 TAS2R9Q9NYW1 312 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 BOKQ9UMX3 212 aaPredicted RBP13.42□□□□□ -0.26
SF3B5-201ENST00000367569 DCHS2Q6V1P9 2916 aa13.42□□□□□ -0.26
SF3B5-201ENST00000367569 A0A087WV62 115 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 A0A1W2PRB8 838 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 CAPN14A8MX76 684 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 NPIPA2E9PIF3 369 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 NPIPA3F8WFD2 350 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 PLOD2O00469 737 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 CFLARO15519 480 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 ICOSLGO75144 302 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 BCAS2O75934 225 aaPredicted RBP13.41□□□□□ -0.26
SF3B5-201ENST00000367569 CYP4B1P13584 511 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 KRT20P35900 424 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 PTGDSP41222 190 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 CASP3P42574 277 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 FRKP42685 505 aaPredicted RBP13.41□□□□□ -0.26
SF3B5-201ENST00000367569 STX5Q13190 355 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 MAD2L1Q13257 205 aaPredicted RBP13.41□□□□□ -0.26
SF3B5-201ENST00000367569 TP53BP2Q13625 1128 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 TOMM20Q15388 145 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 SPDYE7PQ495Y7 208 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 FNDC7Q5VTL7 733 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 XKRXQ6PP77 449 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 TRIM42Q8IWZ5 723 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 RIMKLAQ8IXN7 391 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 FAM109AQ8N4B1 249 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 OR5M9Q8NGP3 310 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 SLC9A6Q92581 669 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 ERP27Q96DN0 273 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 MTERF3Q96E29 417 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 FAM120BQ96EK7 910 aaKnown RBP13.41□□□□□ -0.26
SF3B5-201ENST00000367569 THOC1Q96FV9 657 aaKnown RBP13.41□□□□□ -0.26
SF3B5-201ENST00000367569 ZNF764Q96H86 408 aaPredicted RBP13.41□□□□□ -0.26
SF3B5-201ENST00000367569 COL21A1Q96P44 957 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 MS4A4EQ96PG1 132 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 OR52B2Q96RD2 323 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 DUSP26Q9BV47 211 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 DPY30Q9C005 99 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 VIPAS39Q9H9C1 493 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 ZFP64Q9NPA5 681 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 CHST11Q9NPF2 352 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 ZCCHC3Q9NUD5 404 aaKnown RBP13.41□□□□□ -0.26
SF3B5-201ENST00000367569 ASIC5Q9NY37 505 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 CNIH4Q9P003 139 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 SPRR3Q9UBC9 169 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 MEMO1Q9Y316 297 aa13.41□□□□□ -0.26
SF3B5-201ENST00000367569 TACC2O95359 2948 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 KIAA1549Q9HCM3 1950 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 MED12Q93074 2177 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 UQCRHLA0A096LP55 91 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 HMGB1P1B2RPK0 211 aaPredicted RBP13.4□□□□□ -0.26
SF3B5-201ENST00000367569 C19orf84I3L1E1 186 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 TO15178 435 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 HDAC3O15379 428 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 GMFGO60234 142 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 TSPAN2O60636 221 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 DIAPH2O60879 1101 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 TRIM3O75382 744 aaPredicted RBP13.4□□□□□ -0.26
SF3B5-201ENST00000367569 IGKV1D-16P01601 117 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 ENDOUP21128 410 aaKnown RBP13.4□□□□□ -0.26
SF3B5-201ENST00000367569 ELAVL4P26378 380 aaKnown RBP13.4□□□□□ -0.26
SF3B5-201ENST00000367569 GABRA3P34903 492 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 CASP9P55211 416 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 DCAF7P61962 342 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 RPS26P62854 115 aaKnown RBP13.4□□□□□ -0.26
SF3B5-201ENST00000367569 PPP2R2AP63151 447 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 ZNHIT3Q15649 155 aaPredicted RBP13.4□□□□□ -0.26
SF3B5-201ENST00000367569 SPANXN4Q5MJ08 99 aa13.4□□□□□ -0.26
SF3B5-201ENST00000367569 OR5M10Q6IEU7 315 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms