RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CHRNA4P43681 627 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SNTB1Q13884 538 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 CT83Q5H943 113 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF57Q68EA5 555 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 OR5M10Q6IEU7 315 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 DPY19L2P2Q6ZN68 376 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 PIGZQ86VD9 579 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 IMP4Q96G21 291 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 TSSK3Q96PN8 268 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 FNDC11Q9BVV2 318 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SUSD2Q9UGT4 822 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 USP21Q9UK80 565 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 OR5K4A6NMS3 321 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 TOX3O15405 576 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ALPLP05186 524 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 PROS1P07225 676 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 GNALP38405 381 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 PMELP40967 661 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 DCAF7P61962 342 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 UBAP2LQ14157 1087 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SNAPC1Q16533 368 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SERINC5Q86VE9 423 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 GTPBP8Q8N3Z3 284 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 NTN4Q9HB63 628 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 F6UZH7 168 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 HEXAP06865 529 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 FSHRP23945 695 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 LAP3P28838 519 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 C18orf21Q32NC0 220 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 UBL7Q96S82 380 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ASAH2Q9NR71 780 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ADAMTS6Q9UKP5 1117 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 NRCAMQ92823 1304 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 KLRK1P26718 216 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 TAZQ16635 292 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 CLSTN3Q9BQT9 956 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 CAMK2AQ9UQM7 478 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 MRPS28Q9Y2Q9 187 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 LOC390937A0A1W2PQ73 354 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 FAM221BA6H8Z2 402 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 HAND1O96004 215 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 TREML1Q86YW5 311 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 KREMEN1Q96MU8 473 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 TAS2R3Q9NYW6 316 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 PITPNC1Q9UKF7 332 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 GNG14A0A1W2PPG7 69 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF670-ZNF695F2Z2N8 137 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 PEX2P28328 305 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 HSD11B1P28845 292 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 PBLDP30039 288 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 RPS3AP61247 264 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SRSF4Q08170 494 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF227Q86WZ6 799 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SEPT12Q8IYM1 358 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 CASTOR1Q8WTX7 329 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 DUSP9Q99956 384 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 VNN3Q9NY84 501 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 CRLS1Q9UJA2 301 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 U3KQV3 271 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF587BE7ETH6 402 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SCO2O43819 266 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF286BP0CG31 522 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 STAG3L1P0CL83 205 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 OR4K14Q8NGD5 310 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 OR2I1PQ8NGU4 316 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 TSSK6Q9BXA6 273 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 OR2AG1Q9H205 316 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 KCNJ16Q9NPI9 418 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF586Q9NXT0 402 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 BCL9O00512 1426 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 CCDC163A0A0D9SF12 145 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 MEIS3P2A8K0S8 358 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SLC1A7O00341 560 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 CCNOP22674 350 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ITGB8P26012 769 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 EPHA8P29322 1005 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 GRM7Q14831 915 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 MMACHCQ9Y4U1 282 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 A0A0B4J203 849 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SORBS2O94875 1100 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 PDCD2LQ9BRP1 358 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 WDCPQ9H6R7 721 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 PPIEQ9UNP9 301 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 A0A1W2PS29 197 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF354AO60765 605 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SOD2P04179 222 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 RHOCP08134 193 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ATP1B2P14415 290 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 OMPP47874 163 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 RPS20P60866 119 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 KRTDAPP60985 99 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 RPL7L1Q6DKI1 246 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 GALNT5Q7Z7M9 940 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 FAM86B1Q8N7N1 296 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 NXPE3Q969Y0 559 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 DNAJC19Q96DA6 116 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 CLCA2Q9UQC9 943 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ARL2-SNX15V9GYD0 113 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 A0A0J9YYE9 177 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 DHRS7CA6NNS2 312 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms