RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 NAA50Q9GZZ1 169 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 VNN2O95498 520 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 RAP2BP61225 183 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 MEF2AQ02078 507 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 ESPL1Q14674 2120 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 C18orf21Q32NC0 220 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 PLK5Q496M5 336 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 HBMQ6B0K9 141 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 TMEM151AQ8N4L1 468 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 CNOT9Q92600 299 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 ANKRD19PQ9H560 264 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 IGFLR1Q9H665 355 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 ZFP57Q9NU63 452 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 CASP3P42574 277 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR2T4Q8NH00 348 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR2T11Q8NH01 316 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 F2RL3Q96RI0 385 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 PPIEQ9UNP9 301 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 POLHQ9Y253 713 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 ARRDC5A6NEK1 342 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 ZNF91Q05481 1191 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 ITPRIPL2Q3MIP1 535 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 SCGB2B2Q4G0G5 96 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 ATAD3CQ5T2N8 411 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 SLC22A15Q8IZD6 547 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 ADAMTS14Q8WXS8 1223 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 NKD1Q969G9 470 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 BEX2Q9BXY8 128 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 EPHX3Q9H6B9 360 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 HS3ST2Q9Y278 367 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 GTF2F2P13984 249 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 CIDECQ96AQ7 238 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 AIFM2Q9BRQ8 373 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 SYT17Q9BSW7 474 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 METTL8Q9H825 291 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 NDRG4Q9ULP0 352 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 MTHFD2P13995 350 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 GKP32189 559 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 CDKN2CP42773 168 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 HBA1P69905 142 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 RAB11BQ15907 218 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 COL28A1Q2UY09 1125 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 CDRT4Q8N9R6 151 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 GABARAPL3Q9BY60 117 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 POLDIP3Q9BY77 421 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 PPIL3Q9H2H8 161 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 SDHAF3Q9NRP4 125 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 GPRIN2O60269 458 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 GIPRP48546 466 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 TMEM107Q6UX40 140 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 THAP7Q9BT49 309 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 CDCA4Q9BXL8 241 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.17□□□□□ -0.622e-10■■□□□ 11.6
CDC42BPA-202ENST00000366764 FN3KQ9H479 309 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 SYT5O00445 386 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 HSD11B1P28845 292 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 HTR3DQ70Z44 454 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 NEIL2Q969S2 332 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 SLC41A3Q96GZ6 507 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 DPH7Q9BTV6 452 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 POLMQ9NP87 494 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 ABRACLQ9P1F3 81 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 C2orf74A8MZ97 194 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 CHMP24386 653 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 CST5P28325 142 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 ETV6P41212 452 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 AIMP2Q13155 320 aaKnown RBP11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 TEAD2Q15562 447 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 TBC1D25Q3MII6 688 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 CLLU1OSQ5K130 101 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 TMEM205Q6UW68 189 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 ZNF551Q7Z340 670 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 NRMQ8IXM6 262 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 GALNT6Q8NCL4 622 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 NEK7Q8TDX7 302 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 DZANK1Q9NVP4 752 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 SPTBN1Q01082 2364 aaKnown RBP11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 ASXL3Q9C0F0 2248 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 FGF18O76093 207 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 SYN1P17600 705 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 ITGA3P26006 1051 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 DAPP51397 102 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 SLC5A12Q1EHB4 618 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 SLC9B2Q86UD5 537 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 C3orf58Q8NDZ4 430 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 ELP5Q8TE02 316 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 PHYHIPQ92561 330 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 VRK1Q99986 396 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 KLF16Q9BXK1 252 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 HHLA1C9JL84 531 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 RAB8AP61006 207 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 GPN3Q9UHW5 284 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 K7ERQ8 282 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 KLK8O60259 260 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 TGM6O95932 706 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 TNFP01375 233 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 C6P13671 934 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 AFMIDQ63HM1 303 aa11.16□□□□□ -0.62
CDC42BPA-202ENST00000366764 ZNF765Q7L2R6 523 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms