RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 SPATA6LQ8N4H0 392 aa7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 C17orf47Q8NEP4 570 aa7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 SEMA6DQ8NFY4 1073 aa7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 CALML6Q8TD86 181 aa7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 PTCD3Q96EY7 689 aaKnown RBP7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 CACNG6Q9BXT2 260 aa7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 SAP130Q9H0E3 1048 aa7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 C12orf65Q9H3J6 166 aaKnown RBP7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 FOLH1BQ9HBA9 442 aa7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 DNAJC11Q9NVH1 559 aa7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 CISD1Q9NZ45 108 aaKnown RBP7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 GPRC5BQ9NZH0 403 aa7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 DKKL1Q9UK85 242 aa7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 GPR52Q9Y2T5 361 aa7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 MRPS18CQ9Y3D5 142 aaKnown RBP7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 SPACA6W5XKT8 324 aa7.55□□□□□ -1.2
HMGB1P39-201ENST00000366304 IGHV4-61A0A0C4DH41 118 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 A0A0G2JK05 382 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 OR2M5A3KFT3 312 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 EFCAB8A8MWE9 144 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 VWC2LB2RUY7 222 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 CBFA2T2O43439 604 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 SS18L1O75177 396 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 CDH16O75309 829 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 IGHA1P01876 353 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 GBAP04062 536 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 PCNAP12004 261 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 MLNP12872 115 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 PEPDP12955 493 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 SLC25A16P16260 332 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 KRT15P19012 456 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 PSMB1P20618 241 aaKnown RBP7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 IL11P20809 199 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 USF1P22415 310 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 GRK2P25098 689 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 BSGP35613 385 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 GGT5P36269 586 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 COMPP49747 757 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 HNMTP50135 292 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 IRF9Q00978 393 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 DUSP2Q05923 314 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 PLCXD2Q0VAA5 305 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 CHIT1Q13231 466 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 BIKQ13323 160 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 CR1LQ2VPA4 569 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 HIST2H2BDQ6DRA6 164 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 FAM166AQ6J272 317 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 TTC27Q6P3X3 843 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 TRMT10BQ6PF06 316 aaKnown RBP7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 C4orf22Q6V702 233 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 CHMP1BQ7LBR1 199 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 GALNT12Q8IXK2 581 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 LAS2Q8IYD9 372 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 GABRG1Q8N1C3 465 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 ZCCHC7Q8N3Z6 543 aaKnown RBP7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 RFLNBQ8N5W9 214 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 METTL25Q8N6Q8 603 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 FADS6Q8N9I5 356 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 SNX31Q8N9S9 440 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 OR7G3Q8NG95 312 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 OR6K3Q8NGY3 331 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 SGMS2Q8NHU3 365 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 PIWIL2Q8TC59 973 aaKnown RBP7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 FAM168AQ92567 244 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 TMBIM1Q969X1 311 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 NPAS1Q99742 590 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 PELOQ9BRX2 385 aaKnown RBP7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 NOP53Q9NZM5 478 aaKnown RBP7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 FLRT3Q9NZU0 649 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 ASIC3Q9UHC3 531 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 ZNF639Q9UID6 485 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 KCNS2Q9ULS6 477 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 PSAT1Q9Y617 370 aa7.54□□□□□ -1.2
HMGB1P39-201ENST00000366304 E7EQL1 145 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 H3BML4 177 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 DYNC1I1O14576 645 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 KIAA0513O60268 411 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 TSPAN2O60636 221 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 CBX7O95931 251 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 FAM58BPP0C7Q3 252 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 NR2F6P10588 404 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 COL6A2P12110 1019 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 HPDP32754 393 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 EMDP50402 254 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 NEK2P51955 445 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 DSCR9P59020 149 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 TAS2R39P59534 338 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 SPOCK1Q08629 439 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 FGFBP1Q14512 234 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 SQLEQ14534 574 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 TGFBIQ15582 683 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 OR4D1Q15615 310 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 NRF1Q16656 503 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 PRR31Q5SQ13 230 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 TEDDM1Q5T9Z0 273 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 SEL1L2Q5TEA6 688 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 B3GLCTQ6Y288 498 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 TREML1Q86YW5 311 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 MCUQ8NE86 351 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 SRFBP1Q8NEF9 429 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms