RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 HOXB13Q92826 284 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ELP4Q96EB1 424 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 AMDHD1Q96NU7 426 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 BBS4Q96RK4 519 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 UCN2Q96RP3 112 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 G6PC3Q9BUM1 346 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SLC24A3Q9HC58 644 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SERHLQ9NQF3 203 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 FBXL2Q9UKC9 423 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 MAPRE3Q9UPY8 281 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 WIF1Q9Y5W5 379 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 PTGDR2Q9Y5Y4 395 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 MED12Q93074 2177 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 FAM221AA4D161 298 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 AZIN1O14977 448 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 FADS1O60427 444 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ZIC3O60481 467 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TRIM13O60858 407 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 FGF4P08620 206 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SRD5A2P31213 254 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 MAP3K8P41279 467 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 MC3RP41968 323 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 NCBP2P52298 156 aaKnown RBP eCLIP12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CYP27C1Q4G0S4 372 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 KANK2Q63ZY3 851 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ARSKQ6UWY0 536 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TMEM107Q6UX40 140 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 WDR53Q7Z5U6 358 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TRABD2AQ86V40 505 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TRMOQ9BU70 441 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 C1orf109Q9NX04 203 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 JKAMPQ9P055 326 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 LGALS13Q9UHV8 139 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CAMK2AQ9UQM7 478 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 DNAJC15Q9Y5T4 150 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SPG11Q96JI7 2443 aa12.42□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ANKHD1Q8IWZ3 2542 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SLC28A1O00337 649 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 DVL2O14641 736 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 COQ9O75208 318 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SEC22BO75396 215 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 IL2RAP01589 272 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CYP4B1P13584 511 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 BMP5P22003 454 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 FRKP42685 505 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 LHX2P50458 406 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 VSNL1P62760 191 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 GAB1Q13480 694 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TOMM20Q15388 145 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 RFTN2Q52LD8 501 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CES4AQ5XG92 561 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CDH24Q86UP0 819 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TRIM42Q8IWZ5 723 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 RIBC1Q8N443 379 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 FADS6Q8N9I5 356 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CCDC63Q8NA47 563 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 C9orf106Q8NAJ2 232 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 EFHD2Q96C19 240 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 APOPT1Q96IL0 206 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TUBA1CQ9BQE3 449 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ZNF559Q9BR84 538 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 LMF2Q9BU23 707 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 RTN4RQ9BZR6 473 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 LRTM1Q9HBL6 345 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 MIEF1Q9NQG6 463 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 NTMQ9P121 344 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 MID2Q9UJV3 735 aa12.41□□□□□ -0.42
TNFRSF1A-202ENST00000366159 C17orf51A8MQB3 221 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 LSM1O15116 133 aaKnown RBP12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 RGS14O43566 566 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CRCPO75575 148 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SDC1P18827 310 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CHMP24386 653 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 GRK2P25098 689 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CTSSP25774 331 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 IL12BP29460 328 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ALDH3A1P30838 453 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ASCL1P50553 236 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CLDN18P56856 261 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 B3GALT5-AS1P59052 145 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 PDE7AQ13946 482 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ZNF385BQ569K4 471 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 OR5M10Q6IEU7 315 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 OR6Y1Q8NGX8 325 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 OR14L1PQ8NHC6 308 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CDC26Q8NHZ8 85 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TRIB1Q96RU8 372 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CCT7Q99832 543 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TAS2R10Q9NYW0 307 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SENP1Q9P0U3 644 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SLC17A7Q9P2U7 560 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CBLCQ9ULV8 474 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 DOCK7Q96N67 2140 aa12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 MAP1AP78559 2803 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TLDC2A0PJX2 215 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 NPHS1O60500 1241 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 CTAG2O75638 210 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 RCBTB2O95199 551 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 IL33O95760 270 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 IL18BPO95998 194 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms