RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 ABCG8Q9H221 673 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 OSGEPL1Q9H4B0 414 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 DCTPP1Q9H773 170 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 SLC25A22Q9H936 323 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 CALHM2Q9HA72 323 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 ADGRL4Q9HBW9 690 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 NEK6Q9HC98 313 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 PLCB1Q9NQ66 1216 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 ZNF355PQ9NSJ1 428 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 CENPMQ9NSP4 180 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 DNAJC11Q9NVH1 559 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 NLE1Q9NVX2 485 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 SLC24A2Q9UI40 661 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 ZNF639Q9UID6 485 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 ZNF222Q9UK12 451 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 NAALADL1Q9UQQ1 740 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 DYNC1LI1Q9Y6G9 523 aaKnown RBP-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 KMT2EQ8IZD2 1858 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 PDS5BQ9NTI5 1447 aa-0.48□□□□□ -2.49
RNU6-54P-201ENST00000365563 THSD7BQ9C0I4 1608 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 IGHV1OR15-1A0A075B7D0 117 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 A0A0A6YYD4 124 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 A0A1W2PPH5 198 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 YJEFN3A6XGL0 299 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 TMEM150CB9EJG8 249 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 C11orf98E9PRG8 122 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 NPIPA3F8WFD2 350 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 K7ERI5 159 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 UBXN8O00124 270 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 TLR4O00206 839 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 CLDN4O14493 209 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 XKRYO14609 159 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 MRPS12O15235 138 aaKnown RBP-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 AHCYL1O43865 530 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 FAM189A1O60320 539 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 OR10H3O60404 316 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 CCDC22O60826 627 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 CSO75390 466 aaKnown RBP-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 CABYRO75952 493 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 KLHL2O95198 593 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 SNAPINO95295 136 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 KRT14P02533 472 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 SLC4A1P02730 911 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 CLTBP09497 229 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 GIPP09681 153 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 LINGO3P0C6S8 592 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 OR8U8P0C7N1 319 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 HSPA1AP0DMV8 641 aaKnown RBP-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 HSPA1BP0DMV9 641 aaKnown RBP-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 NR2F1P10589 423 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 PFKFB1P16118 471 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 ALOX12P18054 663 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 ERCC2P18074 760 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 CYP11B2P19099 503 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 VDAC1P21796 283 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 PTBP1P26599 531 aaKnown RBP eCLIP-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 GRK6P43250 576 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 EFNB2P52799 333 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 CRISP3P54108 245 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 MFAP4P55083 255 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 CDH8P55286 799 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 RPP38P78345 283 aaKnown RBP-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 CDKL1Q00532 357 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 UBXN1Q04323 297 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 WASHC5Q12768 1159 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 ABRQ12979 859 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 LCP2Q13094 533 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 TPBGQ13641 420 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 CEACAM7Q14002 265 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 GRB7Q14451 532 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 PSG5Q15238 335 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 PKN2Q16513 984 aaKnown RBP-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 CAMK4Q16566 473 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 AANATQ16613 207 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 GPAT3Q53EU6 434 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 CMPK2Q5EBM0 449 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 CASC10Q5T4H9 136 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 SHEQ5VZ18 495 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 CASP12Q6UXS9 341 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 UNQ9165/PRO28630Q6UXU0 137 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 CLEC17AQ6ZS10 378 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 SKA3Q8IX90 412 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 GUF1Q8N442 669 aaKnown RBP-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 NECAP1Q8NC96 275 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 C1orf131Q8NDD1 294 aaKnown RBP-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 OR5M1Q8NGP8 315 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 ST8SIA4Q92187 359 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 RAD54LQ92698 747 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 USP6NLQ92738 828 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 MRPL24Q96A35 216 aaKnown RBP-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 HVCN1Q96D96 273 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 PERPQ96FX8 193 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 RPGRIP1Q96KN7 1286 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 GDAP1L1Q96MZ0 367 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 ZNF317Q96PQ6 595 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 RAB40CQ96S21 281 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 ABHD1Q96SE0 405 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 SRSF8Q9BRL6 282 aaKnown RBP-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 TMEM121Q9BTD3 319 aa-0.49□□□□□ -2.49
RNU6-54P-201ENST00000365563 APOL6Q9BWW8 343 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms