RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 SLC44A2Q8IWA5 706 aaPredicted RBP19.14■□□□□ 0.65
SHISA4-201ENST00000362011 METTL25Q8N6Q8 603 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 HIPK4Q8NE63 616 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 WDR60Q8WVS4 1066 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 AHCTF1Q8WYP5 2266 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 FIG4Q92562 907 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 CDS1Q92903 461 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 NACC2Q96BF6 587 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 LRGUKQ96M69 825 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 ITPAQ9BY32 194 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 PCDHGB3Q9Y5G1 929 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 PCSK5Q92824 1860 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 A0A1W2PQ72 361 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 C5orf58C9J3I9 102 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 KLK10O43240 276 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 SLC28A2O43868 658 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 NR2F1P10589 423 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 POLE2P56282 527 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 GNA13Q14344 377 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 KPNB1Q14974 876 aaKnown RBP19.13■□□□□ 0.65
SHISA4-201ENST00000362011 INTS11Q5TA45 600 aaKnown RBP19.13■□□□□ 0.65
SHISA4-201ENST00000362011 KIRREL2Q6UWL6 708 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 C16orf62Q7Z3J2 963 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 COX18Q8N8Q8 333 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 OR11G2Q8NGC1 345 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 GPR151Q8TDV0 419 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 FAM162AQ96A26 154 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 EFHD1Q9BUP0 239 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 DENND2DQ9H6A0 471 aaPredicted RBP19.13■□□□□ 0.65
SHISA4-201ENST00000362011 LIPT1Q9Y234 373 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 DTX4Q9Y2E6 619 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 MRPS18BQ9Y676 258 aaKnown RBP19.13■□□□□ 0.65
SHISA4-201ENST00000362011 KCNE3Q9Y6H6 103 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 DOCK10Q96BY6 2186 aa19.13■□□□□ 0.65
SHISA4-201ENST00000362011 A8MUI8 341 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 CREG1O75629 220 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 AK1P00568 194 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 TFPTP0C1Z6 253 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 ATP6V1B2P21281 511 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 GABRA3P34903 492 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 DCAF7P61962 342 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 POU6F2P78424 691 aaPredicted RBP19.12■□□□□ 0.65
SHISA4-201ENST00000362011 PSG6Q00889 435 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 EBPQ15125 230 aaKnown RBP19.12■□□□□ 0.65
SHISA4-201ENST00000362011 TGIF1Q15583 401 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 EXT1Q16394 746 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 SYPL1Q16563 259 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 GPAT3Q53EU6 434 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 HLA-DQA1Q5Y7H0 255 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 HEPHL1Q6MZM0 1159 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 REEP3Q6NUK4 255 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 CYP2R1Q6VVX0 501 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 NDUFAF7Q7L592 441 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 C9orf40Q8IXQ3 194 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 APCDD1LQ8NCL9 501 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 BHLHE22Q8NFJ8 381 aaPredicted RBP19.12■□□□□ 0.65
SHISA4-201ENST00000362011 SLC38A5Q8WUX1 472 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 TMEM19Q96HH6 336 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 NSMCE2Q96MF7 247 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 CALML5Q9NZT1 146 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 ZNF451Q9Y4E5 1061 aa19.12■□□□□ 0.65
SHISA4-201ENST00000362011 NSG1A0A0A6YYJ2 146 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 TRBV11-1A0A0K0K1C0 115 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 C2orf92A0A1B0GVN3 265 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 PRAMEF27A3QJZ7 478 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 A8MVJ9 347 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 B8ZZF3 427 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 K7ENP7 123 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 LIFP15018 202 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 PPICP45877 212 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 CLCN2P51788 898 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 CRISP3P54108 245 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 FUT5Q11128 374 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 IL10RAQ13651 578 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 BTBD16Q32M84 506 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 ARHGAP11BQ3KRB8 267 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 MTX3Q5HYI7 312 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 INO80CQ6PI98 192 aaPredicted RBP19.11■□□□□ 0.65
SHISA4-201ENST00000362011 ANKFN1Q8N957 763 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 CHDHQ8NE62 594 aaPredicted RBP19.11■□□□□ 0.65
SHISA4-201ENST00000362011 PIK3R3Q92569 461 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 IMMP1LQ96LU5 166 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 BTBD9Q96Q07 612 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 GAL3ST4Q96RP7 486 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 BTBD2Q9BX70 525 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 WWTR1Q9GZV5 400 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 GORASP2Q9H8Y8 452 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 Q9N2J8 555 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 IL17BQ9UHF5 180 aa19.11■□□□□ 0.65
SHISA4-201ENST00000362011 ZNF223Q9UK11 482 aaPredicted RBP19.11■□□□□ 0.65
SHISA4-201ENST00000362011 GPR55Q9Y2T6 319 aaPredicted RBP19.11■□□□□ 0.65
SHISA4-201ENST00000362011 HPP00738 406 aa19.1■□□□□ 0.65
SHISA4-201ENST00000362011 TRHRP34981 398 aaPredicted RBP19.1■□□□□ 0.65
SHISA4-201ENST00000362011 ACTR3P61158 418 aa19.1■□□□□ 0.65
SHISA4-201ENST00000362011 RNF4P78317 190 aa19.1■□□□□ 0.65
SHISA4-201ENST00000362011 ELF3P78545 371 aaPredicted RBP19.1■□□□□ 0.65
SHISA4-201ENST00000362011 HPCAP84074 193 aa19.1■□□□□ 0.65
SHISA4-201ENST00000362011 MAPK11Q15759 364 aa19.1■□□□□ 0.65
SHISA4-201ENST00000362011 DCST2Q5T1A1 773 aa19.1■□□□□ 0.65
SHISA4-201ENST00000362011 PRAMEF8Q5VWM4 474 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms