RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 OR14I1A6ND48 311 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 FAM171A2A8MVW0 826 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 STSP08842 583 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 HIST1H1TP22492 207 aaPredicted RBP17.55■□□□□ 0.4
CLIP2-202ENST00000361545 IGFBP6P24592 240 aaPredicted RBP17.55■□□□□ 0.4
CLIP2-202ENST00000361545 TUBA1BP68363 451 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 TUBA4AP68366 448 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 PUDPQ08623 228 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 TUBA1AQ71U36 451 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 CCDC36Q8IYA8 594 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 SAMD12Q8N8I0 201 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 OR5K2Q8NHB8 316 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 PFDN2Q9UHV9 154 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 C14orf166Q9Y224 244 aaKnown RBP17.55■□□□□ 0.4
CLIP2-202ENST00000361545 ENPP4Q9Y6X5 453 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 GJE1A6NN92 205 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 ITGB8P26012 769 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 PRDX1Q06830 199 aaKnown RBP17.55■□□□□ 0.4
CLIP2-202ENST00000361545 ZNF619Q8N2I2 560 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 LINC01465Q8N7H1 131 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 CNIH4Q9P003 139 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 GSTM2P28161 218 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 MAT1AQ00266 395 aaKnown RBP17.55■□□□□ 0.4
CLIP2-202ENST00000361545 ZNF404Q494X3 552 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 OR2T4Q8NH00 348 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 C12orf43Q96C57 262 aaKnown RBP17.55■□□□□ 0.4
CLIP2-202ENST00000361545 CUTCQ9NTM9 273 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 TRBV11-1A0A0K0K1C0 115 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 H0YGG7 62 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 PLOD2O00469 737 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 RNASET2O00584 256 aaKnown RBP17.55■□□□□ 0.4
CLIP2-202ENST00000361545 PPP1R3DO95685 299 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 ARF3P61204 181 aaPredicted RBP17.55■□□□□ 0.4
CLIP2-202ENST00000361545 ZNF423Q2M1K9 1284 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 SPERTQ8NA61 448 aa17.55■□□□□ 0.4
CLIP2-202ENST00000361545 ZNF701Q9NV72 531 aaPredicted RBP17.55■□□□□ 0.4
CLIP2-202ENST00000361545 TMX2-CTNND1H3BSU7 103 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 CDKN2CP42773 168 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 S100A10P60903 97 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 APOFQ13790 326 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 OR5M10Q6IEU7 315 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 SHFQ7M4L6 423 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 GAREM1Q9H706 876 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 ENAMQ9NRM1 1142 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 BTNL2Q9UIR0 455 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 CMAHPQ9Y471 501 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 GFRA2O00451 464 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 HPRP00739 348 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 BMP1P13497 986 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 HSD17B1P14061 328 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 HOXC5Q00444 222 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 TMPRSS12Q86WS5 348 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 LKAAEAR1Q8TD35 194 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 EGLN2Q96KS0 407 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 RIMS3Q9UJD0 308 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 PTBP2Q9UKA9 531 aaKnown RBP17.54■□□□□ 0.4
CLIP2-202ENST00000361545 DDX60Q8IY21 1712 aaKnown RBP17.54■□□□□ 0.4
CLIP2-202ENST00000361545 C13orf42A0A1B0GVH6 325 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 MITFO75030 526 aaPredicted RBP17.54■□□□□ 0.4
CLIP2-202ENST00000361545 HMGA1P17096 107 aaKnown RBP17.54■□□□□ 0.4
CLIP2-202ENST00000361545 HS3ST5Q8IZT8 346 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 AGBL5Q8NDL9 886 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 OR13C3Q8NGS6 347 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 SAMD8Q96LT4 415 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 AP1M2Q9Y6Q5 423 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 NSG1A0A0A6YYJ2 146 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 SCRG1O75711 98 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 PBX2P40425 430 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 ETV4P43268 484 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 CCNJQ5T5M9 372 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 METTL2BQ6P1Q9 378 aaKnown RBP17.54■□□□□ 0.4
CLIP2-202ENST00000361545 IGFN1Q86VF2 1251 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 TIGD4Q8IY51 512 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 ACBD7Q8N6N7 88 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 DTX3Q8N9I9 347 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 NXPE3Q969Y0 559 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 SLC6A18Q96N87 628 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 ATOH8Q96SQ7 321 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 SORT1Q99523 831 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 BEX2Q9BXY8 128 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 BEX1Q9HBH7 125 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 A0A1W2PPW3 197 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 CD8B2A6NJW9 211 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 DCNP07585 359 aaKnown RBP17.54■□□□□ 0.4
CLIP2-202ENST00000361545 CD8BP10966 210 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 TUBA3CQ13748 450 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 CNTN4Q8IWV2 1026 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 DPAGT1Q9H3H5 408 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 C2orf42Q9NWW7 574 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 VAPAQ9P0L0 249 aa17.54■□□□□ 0.4
CLIP2-202ENST00000361545 USP36Q9P275 1121 aaKnown RBP17.54■□□□□ 0.4
CLIP2-202ENST00000361545 DCKP27707 260 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 FXYD6P3P58550 94 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 NKAIN2Q5VXU1 208 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 TMEM236Q5W0B7 351 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 ZNF367Q7RTV3 350 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 IL17RCQ8NAC3 791 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 OR9Q2Q8NGE9 314 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 ASB16Q96NS5 453 aa17.53■□□□□ 0.4
CLIP2-202ENST00000361545 MYNNQ9NPC7 610 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms