RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 TRMT5Q32P41 509 aaKnown RBP12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 TBCELQ5QJ74 424 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 ATAD3BQ5T9A4 648 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 RPUSD3Q6P087 351 aaKnown RBP12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 IL20RBQ6UXL0 311 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 C16orf47Q6ZP98 133 aaPredicted RBP12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 DHDDSQ86SQ9 333 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 RETREG3Q86VR2 466 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 SNX32Q86XE0 403 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 PIAS4Q8N2W9 510 aaPredicted RBP12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 RBMXL3Q8N7X1 1067 aaKnown RBP12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 COX18Q8N8Q8 333 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 TMEM178AQ8NBL3 297 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 FAM110BQ8TC76 370 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 PAQR8Q8TEZ7 354 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 OIT3Q8WWZ8 545 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 JADE3Q92613 823 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 ROPN1LQ96C74 230 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 TMCO6Q96DC7 493 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 OMA1Q96E52 524 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 SCMH1Q96GD3 660 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 C16orf58Q96GQ5 468 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 COL21A1Q96P44 957 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 SH3GL1Q99961 368 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.74□□□□□ -0.371e-6■■■■□ 23.5
NSMCE1-201ENST00000361439 EFCAB1Q9HAE3 211 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 HHATLQ9HCP6 504 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 SLC6A13Q9NSD5 602 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 PLA2G3Q9NZ20 509 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 CNIH4Q9P003 139 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 LIPT1Q9Y234 373 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 IGSF10Q6WRI0 2623 aa12.74□□□□□ -0.37
NSMCE1-201ENST00000361439 EVPLLA8MZ36 301 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 K7EM74 188 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 FBP2O00757 339 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 TSPAN2O60636 221 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 ZNF354AO60765 605 aaPredicted RBP12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 CD1EP15812 388 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 IL12BP29460 328 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 MNAT1P51948 309 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 SNTA1Q13424 505 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 NFYCQ13952 458 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 KRT72Q14CN4 511 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 DUSP5Q16690 384 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 ZNF766Q5HY98 468 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 ZNF468Q5VIY5 522 aaPredicted RBP12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 SLC22A10Q63ZE4 541 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 REP15Q6BDI9 236 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 SPINK14Q6IE38 97 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 SLC25A25Q6KCM7 469 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 HEPHL1Q6MZM0 1159 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 ANGPTL8Q6UXH0 198 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 HACD2Q6Y1H2 254 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 DNAJC14Q6Y2X3 702 aaPredicted RBP12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 RNF130Q86XS8 419 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 BCORP1Q8N888 145 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 TEX19Q8NA77 164 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 CHDHQ8NE62 594 aaPredicted RBP12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 PMM1Q92871 262 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 TMBIM1Q969X1 311 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 C5orf34Q96MH7 638 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 OR7D2Q96RA2 312 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 CGREF1Q99674 301 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 OR51I1Q9H343 314 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 ZNF71Q9NQZ8 489 aaPredicted RBP12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 POLE3Q9NRF9 147 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 SLC25A37Q9NYZ2 338 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 VAPAQ9P0L0 249 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 SLAMF8Q9P0V8 285 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 MAP10Q9P2G4 905 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 ABCG2Q9UNQ0 655 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 AP3M1Q9Y2T2 418 aa12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 KLF13Q9Y2Y9 288 aaPredicted RBP12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 CHCHD2Q9Y6H1 151 aaPredicted RBP12.73□□□□□ -0.37
NSMCE1-201ENST00000361439 KLRC4-KLRK1H3BQV0 150 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 HMGN4O00479 90 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 MRASO14807 208 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 HS6ST1O60243 411 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 NME2P1O60361 137 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 REM1O75628 298 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 KCNK2O95069 426 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 P04436 131 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 SP1P08047 785 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 NGFRP08138 427 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 BMP2P12643 396 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 GPX2P18283 190 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 NME2P22392 152 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 MVDP53602 400 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 LY6DQ14210 128 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 GNA13Q14344 377 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 RGNQ15493 299 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 NNATQ16517 81 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 ARHGAP11BQ3KRB8 267 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 RUNDC3AQ59EK9 446 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 ZNF227Q86WZ6 799 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 TREML1Q86YW5 311 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 MSRB3Q8IXL7 192 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 CLEC4FQ8N1N0 589 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 FBXW8Q8N3Y1 598 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 METTL25Q8N6Q8 603 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms