RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 A0A0U1RQS6 177 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 MRPL3P09001 348 aaKnown RBP12.73□□□□□ -0.37
LDB3-202ENST00000361373 RPL34P49207 117 aaKnown RBP12.73□□□□□ -0.37
LDB3-202ENST00000361373 CBFBQ13951 182 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 LPAL2Q16609 132 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 HMBOX1Q6NT76 420 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 ENPP6Q6UWR7 440 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 VTCN1Q7Z7D3 282 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 KHSRPQ92945 711 aaKnown RBP eCLIP12.73□□□□□ -0.37
LDB3-202ENST00000361373 C12orf43Q96C57 262 aaKnown RBP12.73□□□□□ -0.37
LDB3-202ENST00000361373 ZNF300Q96RE9 604 aaPredicted RBP12.73□□□□□ -0.37
LDB3-202ENST00000361373 INPP5KQ9BT40 448 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 C2orf42Q9NWW7 574 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 NXT1Q9UKK6 140 aaKnown RBP12.73□□□□□ -0.37
LDB3-202ENST00000361373 DENRO43583 198 aaKnown RBP12.73□□□□□ -0.37
LDB3-202ENST00000361373 XPNPEP2O43895 674 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 CTXN1P60606 82 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 ZMYND11Q15326 602 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 C3P1Q6ZMU1 363 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 GALNT10Q86SR1 603 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 SYNPOQ8N3V7 929 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 TAMM41Q96BW9 452 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 GORASP2Q9H8Y8 452 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 EMCNQ9ULC0 261 aa12.73□□□□□ -0.37
LDB3-202ENST00000361373 USP54Q70EL1 1684 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 RAD51DO75771 328 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 KCNK5O95279 499 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 GPR4P46093 362 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 ANKDD1AQ495B1 522 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 PAGE3Q5JUK9 113 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 UBQLNLQ8IYU4 475 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 HOXB13Q92826 284 aaPredicted RBP12.72□□□□□ -0.37
LDB3-202ENST00000361373 SFXN2Q96NB2 322 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 CLMPQ9H6B4 373 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 DCAF13Q9NV06 445 aaKnown RBP12.72□□□□□ -0.37
LDB3-202ENST00000361373 SLC39A1Q9NY26 324 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 CLEC4EQ9ULY5 219 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 PHIPQ8WWQ0 1821 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 MEGF11A6BM72 1044 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 GABRR3A8MPY1 467 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 NAA10P41227 235 aaPredicted RBP12.72□□□□□ -0.37
LDB3-202ENST00000361373 DAP3P51398 398 aaKnown RBP12.72□□□□□ -0.37
LDB3-202ENST00000361373 KIAA1024LP59773 190 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 INO80EQ8NBZ0 244 aaPredicted RBP12.72□□□□□ -0.37
LDB3-202ENST00000361373 OR52E2Q8NGJ4 325 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 ZFPM2Q8WW38 1151 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 BTBD2Q9BX70 525 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 HDHD5Q9BXW7 423 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 SLC6A16Q9GZN6 736 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 CUTCQ9NTM9 273 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 CPMP14384 443 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 CD27P26842 260 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 UGT2B10P36537 528 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 MLLT10P55197 1068 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 TLE3Q04726 772 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 MELKQ14680 651 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 LHX8Q68G74 356 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 LRFN4Q6PJG9 635 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 TMEM184AQ6ZMB5 413 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 DTWD1Q8N5C7 304 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 CNIH3Q8TBE1 160 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 NETO1Q8TDF5 533 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 C5AR2Q9P296 337 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 TRBV2A0A0J9YWF9 115 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 ZDHHC11BP0C7U3 371 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 GSTT2P0CG29 244 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 ANXA3P12429 323 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 GLULP15104 373 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 SOX2P48431 317 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 RPL19P84098 196 aaKnown RBP12.72□□□□□ -0.37
LDB3-202ENST00000361373 RAB39AQ14964 217 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 TMEFF1Q8IYR6 380 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 OR14A16Q8NHC5 309 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 GRPEL2Q8TAA5 225 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 MAL2Q969L2 176 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 PITX2Q99697 317 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 ERVK-19Q9WJR5 959 aa12.72□□□□□ -0.37
LDB3-202ENST00000361373 SEC14L5O43304 696 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 CSNK2A1P68400 391 aaPredicted RBP12.71□□□□□ -0.37
LDB3-202ENST00000361373 PSPHP78330 225 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 NKX3-2P78367 333 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 ODF4Q2M2E3 257 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 SCGB2B2Q4G0G5 96 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 MANEAQ5SRI9 462 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 CEACAM19Q7Z692 300 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 L3MBTL4Q8NA19 623 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 BORCS8Q96FH0 119 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 CXCL16Q9H2A7 254 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 ACOT13Q9NPJ3 140 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 ENAMQ9NRM1 1142 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.71□□□□□ -0.37
LDB3-202ENST00000361373 CLIC3O95833 236 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 HRGP04196 525 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 TSFMP43897 325 aaKnown RBP12.71□□□□□ -0.37
LDB3-202ENST00000361373 RAB38P57729 211 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 RIPPLY1Q0D2K3 151 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 GTDC1Q4AE62 458 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 DCST2Q5T1A1 773 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 GARNL3Q5VVW2 1013 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms