RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 L3MBTL4Q8NA19 623 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 MUS81Q96NY9 551 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 CHP1Q99653 195 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 LMF2Q9BU23 707 aaKnown RBP5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 PLK3Q9H4B4 646 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 HOMER3Q9NSC5 361 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 LAMP3Q9UQV4 416 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 SLC25A15Q9Y619 301 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 A0A1B0GUS0 222 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 A0A1W2PP18 115 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 DNPH1O43598 174 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 CBX7O95931 251 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 PABPC4LP0CB38 370 aaKnown RBP5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 ZNF37AP17032 561 aaPredicted RBP5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 PRR5P85299 388 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 IRF9Q00978 393 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 CYP27C1Q4G0S4 372 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 ZNF628Q5EBL2 1059 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 THEMIS2Q5TEJ8 643 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 LIPJQ5W064 366 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 SULT1C3Q6IMI6 304 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 ESPNLQ6ZVH7 1005 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 CCDC91Q7Z6B0 441 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 ADAMTSL2Q86TH1 951 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 CNGA4Q8IV77 575 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 NUP37Q8NFH4 326 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 WDR20Q8TBZ3 569 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 NEU4Q8WWR8 484 aaPredicted RBP5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 RGMAQ96B86 450 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 OMA1Q96E52 524 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 PHACTR1Q9C0D0 580 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 MED29Q9NX70 200 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 MAT2BQ9NZL9 334 aa5.28□□□□□ -1.56
CDC42SE2-201ENST00000360515 ARPC4-TTLL3A0A0A6YYG9 625 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 IQANK1A0A1B0GTG1 560 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 STAMBPO95630 424 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 TFP02787 698 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 CPOXP36551 454 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 SLC16A1P53985 500 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 RAC1P63000 192 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 PHC1P78364 1004 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 BSPH1Q075Z2 132 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 ITGADQ13349 1161 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 CR1LQ2VPA4 569 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 GGTA1PQ4G0N0 100 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 SPANXN3Q5MJ09 141 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 PAQR3Q6TCH7 311 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZNF550Q7Z398 422 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 KBTBD8Q8NFY9 601 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 S100PBPQ96BU1 408 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 HEMGNQ9BXL5 484 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 LIN28AQ9H9Z2 209 aaKnown RBP5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 SDHAF3Q9NRP4 125 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 FKBP7Q9Y680 259 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 PKD1L1Q8TDX9 2849 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 SDR42E2A6NKP2 422 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 PLOD3O60568 738 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 HSPA4LO95757 839 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 PPIAL4GP0DN37 164 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 GATA3P23771 443 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 GRK2P25098 689 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 NUDT6P53370 316 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 SUMO3P55854 103 aaPredicted RBP5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 HERVK_113P63132 956 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 ERVK-8P63133 956 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 LGALS3BPQ08380 585 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 SLBPQ14493 270 aaKnown RBP eCLIP5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 TAB1Q15750 504 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 DOK3Q7L591 496 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 GALNT10Q86SR1 603 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 SLC43A2Q8N370 569 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 TOR1AIP2Q8NFQ8 470 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 FBXO30Q8TB52 745 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 RNF217Q8TC41 542 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 MAIP1Q8WWC4 291 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 CCDC42Q96M95 316 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 SUCNR1Q9BXA5 334 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 ERVK-6Q9BXR3 956 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZNF442Q9H7R0 627 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 CNOT10Q9H9A5 744 aaKnown RBP5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 XPR1Q9UBH6 696 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 ERVK-19Q9WJR5 959 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZNF814B7Z6K7 855 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 PLPP1O14494 284 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 UGT2B11O75310 529 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 CT45A8P0DMV1 189 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 CT45A9P0DMV2 189 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 MGAT1P26572 445 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 TLX1P31314 330 aaPredicted RBP5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 APOBEC3AP31941 199 aaPredicted RBP5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 HNF4AP41235 474 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 ST13P50502 369 aaKnown RBP5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 MANFP55145 182 aaKnown RBP5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 CT45A2Q5DJT8 189 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 MBOAT1Q6ZNC8 495 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 REC114Q7Z4M0 266 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 YRDCQ86U90 279 aaKnown RBP5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 MISPQ8IVT2 679 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 PALM2Q8IXS6 379 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 UBL4BQ8N7F7 174 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms