RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 H6PDO95479 791 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 CST1P01037 141 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 CHRM4P08173 479 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 CCL4P13236 92 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 S1PR1P21453 382 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 SSTR4P31391 388 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 PGDP52209 483 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 KCNJ10P78508 379 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 FUT7Q11130 342 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 ELAVL1Q15717 326 aaKnown RBP12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 ARHGAP11BQ3KRB8 267 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 DCAF12Q5T6F0 453 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 OVCH1Q7RTY7 1134 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 WDR53Q7Z5U6 358 aaPredicted RBP12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 TMPRSS12Q86WS5 348 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 MARCH9Q86YJ5 346 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 TMEM151BQ8IW70 566 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 COX18Q8N8Q8 333 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 SLC16A11Q8NCK7 471 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 SIMC1Q8NDZ2 872 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 OR7G1Q8NGA0 311 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 OR10Q1Q8NGQ4 319 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 STT3BQ8TCJ2 826 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 SPPL2AQ8TCT8 520 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 ADAMTS14Q8WXS8 1223 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 HOXB13Q92826 284 aaPredicted RBP12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 RNF31Q96EP0 1072 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 LRFN5Q96NI6 719 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 TAAR9Q96RI9 348 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 ZNF184Q99676 751 aaPredicted RBP12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 LMF2Q9BU23 707 aaKnown RBP12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 C9orf16Q9BUW7 83 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 VN1R1Q9GZP7 353 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 RUBCNLQ9H714 662 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 FOLH1BQ9HBA9 442 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 IL1RAPQ9NPH3 570 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 C8orf4Q9NR00 106 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 PNO1Q9NRX1 252 aaKnown RBP12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 SLC22A11Q9NSA0 550 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 IFT80Q9P2H3 777 aaPredicted RBP12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 SEC14L3Q9UDX4 400 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 MKL2Q9ULH7 1088 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 C15orf41Q9Y2V0 281 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 PCDHGA8Q9Y5G5 932 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 HEMK1Q9Y5R4 338 aaPredicted RBP12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 GPC6Q9Y625 555 aaPredicted RBP12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 KCNE3Q9Y6H6 103 aa12.88□□□□□ -0.35
PDLIM5-203ENST00000359265 SPTA1P02549 2419 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 SAC3D1A6NKF1 404 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 MEN1O00255 615 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 NKX2-2O95096 273 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 MFN2O95140 757 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 ALBP02768 609 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 KLK3P07288 261 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 CYC1P08574 325 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 ZGLP1P0C6A0 271 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 CD247P20963 164 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 POU6F2P78424 691 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 DUSP8Q13202 625 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 NSDHLQ15738 373 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 PCSK4Q6UW60 755 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 PIWIL3Q7Z3Z3 882 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 PRSS58Q8IYP2 241 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 CHDHQ8NE62 594 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 OR14A16Q8NHC5 309 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 WDR36Q8NI36 951 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 GPR151Q8TDV0 419 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 DNAJC9Q8WXX5 260 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 PROX1Q92786 737 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 SDCCAG3Q96C92 435 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 FBXL20Q96IG2 436 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 CIB1Q99828 191 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 DDA1Q9BW61 102 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 OR10A5Q9H207 317 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 PRODH2Q9UF12 536 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 GPN3Q9UHW5 284 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 CNOT11Q9UKZ1 510 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 CFL2Q9Y281 166 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 PADI2Q9Y2J8 665 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 CLCA3PQ9Y6N3 262 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 PIEZO2Q9H5I5 2752 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 DSPPQ9NZW4 1301 aa12.87□□□□□ -0.35
PDLIM5-203ENST00000359265 TMEM229AB2RXF0 380 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 C9J4A7 227 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 hCG_2039718K7EN88 272 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 PLD2O14939 933 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 NME6O75414 186 aaPredicted RBP12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 PRSS23O95084 383 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 RECKO95980 971 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 ALPPP05187 535 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 HEXBP07686 556 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 ZNF23P17027 643 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 ITGA2P17301 1181 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 ITPKBP27987 946 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 MAP3K8P41279 467 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 EMDP50402 254 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 VLDLRP98155 873 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 DCST2Q5T1A1 773 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 TMEM164Q5U3C3 297 aa12.86□□□□□ -0.35
PDLIM5-203ENST00000359265 ZBTB49Q6ZSB9 765 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms