RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 TMEM156Q8N614 296 aa13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 PNLDC1Q8NA58 520 aaKnown RBP13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 CYB561A3Q8NBI2 242 aa13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 ZNF740Q8NDX6 193 aa13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 FCAMRQ8WWV6 532 aa13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 NUMBLQ9Y6R0 609 aa13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 METTL21EPA6NDL7 271 aa13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 CASC3O15234 703 aaKnown RBP13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 LDB3O75112 727 aa13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 PRKCAP17252 672 aa13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 PFN3P60673 137 aa13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 FRMPD2BQ6IN97 320 aa13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 MSLNLQ96KJ4 702 aa13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 NANSQ9NR45 359 aa13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 RXFP3Q9NSD7 469 aa13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 SACM1LQ9NTJ5 587 aa13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 ALKBH4Q9NXW9 302 aa13.82□□□□□ -0.2
SLC6A20-202ENST00000358525 LILRB3O75022 631 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 UPK1BO75841 260 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 IFNA7P01567 189 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 IGLV3-27P01718 113 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 ARAFP10398 606 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 HIST1H1TP22492 207 aaPredicted RBP13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 CD40LGP29965 261 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 LBX1P52954 281 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 ACTA2P62736 377 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 ACTG2P63267 376 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 NCCRP1Q6ZVX7 275 aaPredicted RBP13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 USP53Q70EK8 1073 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 OR5K2Q8NHB8 316 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 LRRC20Q8TCA0 184 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 GAB3Q8WWW8 586 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 MUL1Q969V5 352 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 INSM2Q96T92 566 aaPredicted RBP13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 AP1M2Q9Y6Q5 423 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 HYKKA2RU49 373 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 C12orf71A8MTZ7 269 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 LHCGRP22888 699 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 TBPL2Q6SJ96 375 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 GPAT4Q86UL3 456 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 GAL3ST3Q96A11 431 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 RBP7Q96R05 134 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 PITHD1Q9GZP4 211 aaPredicted RBP13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 IRF2BPLQ9H1B7 796 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 ABCG5Q9H222 651 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 CR2P20023 1033 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 RABIFP47224 123 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 MRPL58Q14197 206 aaKnown RBP13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 MBTPS1Q14703 1052 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 SGCBQ16585 318 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 WDR45BQ5MNZ6 344 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 VRK2Q86Y07 508 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 SUN5Q8TC36 379 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 GTPBP2Q9BX10 602 aaKnown RBP13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 FBRSQ9HAH7 460 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 A0A1W2PPL8 197 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 SGK494L7N484 410 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 PTTG1O95997 202 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 MMP12P39900 470 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 TAP2Q03519 686 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 DLEU7Q6UYE1 221 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 ZNF619Q8N2I2 560 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 CDRT4Q8N9R6 151 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 OR6N1Q8NGY5 312 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 SAP130Q9H0E3 1048 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 TP63Q9H3D4 680 aaPredicted RBP13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 TRBV4-1A0A0J9YWV2 114 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 FAM221BA6H8Z2 402 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 RDH16O75452 317 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 SOX30O94993 753 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 ITGBL1O95965 494 aaPredicted RBP13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 HCKP08631 526 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 RGS6P49758 472 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 ALG1LQ6GMV1 187 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 FBXO42Q6P3S6 717 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 Q6ZSR6 202 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 TMPRSS12Q86WS5 348 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 BCL7CQ8WUZ0 217 aaPredicted RBP13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 LINC01599Q8WXQ3 324 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 KCMF1Q9P0J7 381 aa13.81□□□□□ -0.2
SLC6A20-202ENST00000358525 KRBA1A5PL33 1030 aa13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 SDC3O75056 442 aa13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 PSMA6P60900 246 aaKnown RBP13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 COX20Q5RI15 118 aa13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 TMEM69Q5SWH9 247 aa13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 C1orf189Q5VU69 101 aa13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 SLC25A25Q6KCM7 469 aa13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 LEG1Q6P5S2 330 aa13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 RPLP0P6Q8NHW5 317 aa13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 RPL3LQ92901 407 aaKnown RBP13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 GPN2Q9H9Y4 310 aaPredicted RBP13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 TMEM202A6NGA9 273 aa13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 AGAP5A6NIR3 686 aa13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 VAMP1P23763 118 aa13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 OR7D2Q96RA2 312 aa13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 ALG8Q9BVK2 526 aa13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 USP36Q9P275 1121 aaKnown RBP13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 KLHL21Q9UJP4 597 aa13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 DOCK1Q14185 1865 aa13.8□□□□□ -0.2
SLC6A20-202ENST00000358525 A0A1B0GVI7 797 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms