RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 H2AFJQ9BTM1 129 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 TMEM43Q9BTV4 400 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 MED18Q9BUE0 208 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 PTDSS2Q9BVG9 487 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 PAPOLGQ9BWT3 736 aaKnown RBP3.76□□□□□ -1.81
CNGA1-201ENST00000358519 VN1R3Q9BXE9 311 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 CDCA4Q9BXL8 241 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 HDAC8Q9BY41 377 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 KRTAP9-3Q9BYQ3 159 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 DNTTIP1Q9H147 329 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 ABCG4Q9H172 646 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 EVA1AQ9H8M9 152 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SEMA4BQ9NPR2 832 aaPredicted RBP3.76□□□□□ -1.81
CNGA1-201ENST00000358519 NIT2Q9NQR4 276 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SLC22A11Q9NSA0 550 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 ZNF275Q9NSD4 429 aaPredicted RBP3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SLC2A6Q9UGQ3 507 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 ACAD8Q9UKU7 415 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 PRG3Q9Y2Y8 225 aaPredicted RBP3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SAMHD1Q9Y3Z3 626 aaKnown RBP3.76□□□□□ -1.81
CNGA1-201ENST00000358519 MYLKQ15746 1914 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 GPR179Q6PRD1 2367 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 FASNP49327 2511 aaKnown RBP3.76□□□□□ -1.81
CNGA1-201ENST00000358519 C7orf66A4D0T2 115 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 MEIS3P2A8K0S8 358 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 C1QTNF3-AMACRE9PGA6 284 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 PER2O15055 1255 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 TGM5O43548 720 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 VEGFDO43915 354 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 DHFRP00374 187 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 IGHV2-70P01814 119 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 IFNA4P05014 189 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 HLA-DQB2P05538 268 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SYPP08247 313 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 MMP2P08253 660 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SMIM6P0DI80 62 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SFTPCP11686 197 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 NCF1P14598 390 aaPredicted RBP3.76□□□□□ -1.81
CNGA1-201ENST00000358519 POU3F2P20265 443 aaPredicted RBP3.76□□□□□ -1.81
CNGA1-201ENST00000358519 S100PP25815 95 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 ACADLP28330 430 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SLC6A1P30531 599 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 KCNJ3P48549 501 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 ALDH9A1P49189 494 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 STC1P52823 247 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 CAPZA1P52907 286 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 ERVK-25P63136 954 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 CYP4F8P98187 520 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 BCL2L1Q07817 233 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 OPCMLQ14982 345 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 FBXO48Q5FWF7 155 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 CD276Q5ZPR3 534 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SLC25A25Q6KCM7 469 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 FAHD1Q6P587 224 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 CNIH2Q6PI25 160 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SUSD1Q6UWL2 747 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 TPRG1Q6ZUI0 275 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 DPPA4Q7L190 304 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 RAB11FIP2Q7L804 512 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 ZER1Q7Z7L7 766 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 PDZD3Q86UT5 571 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 C12orf40Q86WS4 652 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 STX12Q86Y82 276 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 MCATQ8IVS2 390 aaKnown RBP3.76□□□□□ -1.81
CNGA1-201ENST00000358519 FTMTQ8N4E7 242 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 TRAM1L1Q8N609 369 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 NPWQ8N729 165 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 CLDN22Q8N7P3 220 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 IPMKQ8NFU5 416 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 OR2AP1Q8NGE2 309 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 MOSPD2Q8NHP6 518 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SH3RF2Q8TEC5 729 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SCRN2Q96FV2 425 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 OTUB1Q96FW1 271 aaPredicted RBP3.76□□□□□ -1.81
CNGA1-201ENST00000358519 HMCESQ96FZ2 354 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 ZNF764Q96H86 408 aaPredicted RBP3.76□□□□□ -1.81
CNGA1-201ENST00000358519 LINC00615Q96LM1 132 aaPredicted RBP3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SLC38A3Q99624 504 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 GAL3ST1Q99999 423 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 TREX2Q9BQ50 279 aaPredicted RBP3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SOSTQ9BQB4 213 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 PAAF1Q9BRP4 392 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 RAB11FIP5Q9BXF6 653 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 NKX6-2Q9C056 277 aaPredicted RBP3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SEMA4CQ9C0C4 833 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SIK2Q9H0K1 926 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 OR51M1Q9H341 326 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 ACTL8Q9H568 366 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 ANKRA2Q9H9E1 313 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 TDP1Q9NUW8 608 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SPHK1Q9NYA1 384 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 ZNF226Q9NYT6 803 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SLC25A37Q9NYZ2 338 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 COMMD3Q9UBI1 195 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 LHX3Q9UBR4 397 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 SEC14L4Q9UDX3 406 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 MIOXQ9UGB7 285 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 GPN3Q9UHW5 284 aaPredicted RBP3.76□□□□□ -1.81
CNGA1-201ENST00000358519 GPR160Q9UJ42 338 aa3.76□□□□□ -1.81
CNGA1-201ENST00000358519 STUB1Q9UNE7 303 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms