RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 STEAP1Q9UHE8 339 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 CEMIPQ8WUJ3 1361 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 CD8B2A6NJW9 211 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 C17orf105B2RV13 164 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 CD8BP10966 210 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 GLB1P16278 677 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 PTGER3P43115 390 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 BAXQ07812 192 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 PPP1R8Q12972 351 aaKnown RBP5.52□□□□□ -1.53
BRCA1-203ENST00000357654 MBTPS1Q14703 1052 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 LAPTM4AQ15012 233 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 SPIN4Q56A73 249 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 EGFLAMQ63HQ2 1017 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 C22orf39Q6P5X5 142 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 BRAT1Q6PJG6 821 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 FAM156AQ8NDB6 213 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 SMAP2Q8WU79 429 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-203ENST00000357654 GIMAP1Q8WWP7 306 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 LRTOMTQ8WZ04 291 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 HHIPL1Q96JK4 782 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 LMF2Q9BU23 707 aaKnown RBP5.52□□□□□ -1.53
BRCA1-203ENST00000357654 SPACA1Q9HBV2 294 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 TMEM45AQ9NWC5 275 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 GABRQQ9UN88 632 aa5.52□□□□□ -1.53
BRCA1-203ENST00000357654 AGPAT2O15120 278 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 HDAC3O15379 428 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 KLK10O43240 276 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 ADAM23O75077 832 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 PTHP01270 115 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 GKN3PP0CG01 181 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 PRDX3P30048 256 aaKnown RBP5.51□□□□□ -1.53
BRCA1-203ENST00000357654 SLC6A4P31645 630 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 SOX18P35713 384 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 AQP2P41181 271 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 CSNK1A1P48729 337 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 SLC11A1P49279 550 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 ARSFP54793 590 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 HERVK_113P63132 956 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 ERVK-8P63133 956 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 CXADRP78310 365 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 TMEM115Q12893 351 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-203ENST00000357654 PDLIM3Q53GG5 364 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-203ENST00000357654 TMEM31Q5JXX7 168 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 RNFT1Q5M7Z0 435 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 ATRNL1Q5VV63 1379 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 TMEM65Q6PI78 240 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 PLEKHG7Q6ZR37 379 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 TICAM1Q8IUC6 712 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 SLC15A3Q8IY34 581 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 MINDY1Q8N5J2 469 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 PGM2Q96G03 612 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 NECTIN4Q96NY8 510 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 MICU1Q9BPX6 476 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 TMEM43Q9BTV4 400 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 LRRC4CQ9HCJ2 640 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 HEBP1Q9NRV9 189 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 MYOM1P52179 1685 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 ARHGEF40Q8TER5 1519 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 TMX2-CTNND1H3BSU7 103 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 SHBGP04278 402 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 NDST2P52849 883 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 LIMK2P53671 638 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 ZNF45Q02386 682 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 BST1Q10588 318 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 XKR5Q6UX68 686 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 SEZ6L2Q6UXD5 910 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 TMIGD1Q6UXZ0 262 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 P2RY8Q86VZ1 359 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 MARVELD2Q8N4S9 558 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 OR10G3Q8NGC4 313 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 ZNF461Q8TAF7 563 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 ACTRT1Q8TDG2 376 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 TRMT2BQ96GJ1 504 aaKnown RBP5.51□□□□□ -1.53
BRCA1-203ENST00000357654 CENPNQ96H22 339 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-203ENST00000357654 HOPXQ9BPY8 73 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-203ENST00000357654 GPR62Q9BZJ7 368 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 MEPEQ9NQ76 525 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-203ENST00000357654 MRPL22Q9NWU5 206 aaKnown RBP5.51□□□□□ -1.53
BRCA1-203ENST00000357654 FBXO4Q9UKT5 387 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 WDR37Q9Y2I8 494 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 KDM4FA0A1W2PPD8 638 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 B4GALT4O60513 344 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 LIPCP11150 499 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 RAB6AP20340 208 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 NTSR1P30989 418 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 ETV4P43268 484 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 PTDSS1P48651 473 aaKnown RBP5.51□□□□□ -1.53
BRCA1-203ENST00000357654 VASPP50552 380 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-203ENST00000357654 RAC1P63000 192 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 ZP2Q05996 745 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 IL10RBQ08334 325 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 RUNX3Q13761 415 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 AGAP7PQ5VUJ5 663 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 AADACL3Q5VUY0 350 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 AGAP6Q5VW22 663 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 THSD4Q6ZMP0 1018 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 ZNF704Q6ZNC4 412 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-203ENST00000357654 USP43Q70EL4 1123 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 DAGLBQ8NCG7 672 aa5.51□□□□□ -1.53
BRCA1-203ENST00000357654 RBM15BQ8NDT2 890 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms