RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 VN1R2Q8NFZ6 395 aa6.44□□□□□ -1.38
RTN4-203ENST00000357376 TMEM163Q8TC26 289 aa6.44□□□□□ -1.38
RTN4-203ENST00000357376 TBC1D20Q96BZ9 403 aa6.44□□□□□ -1.38
RTN4-203ENST00000357376 MRPL48Q96GC5 212 aaKnown RBP6.44□□□□□ -1.38
RTN4-203ENST00000357376 DPAGT1Q9H3H5 408 aa6.44□□□□□ -1.38
RTN4-203ENST00000357376 GLIPR2Q9H4G4 154 aa6.44□□□□□ -1.38
RTN4-203ENST00000357376 QPCTLQ9NXS2 382 aa6.44□□□□□ -1.38
RTN4-203ENST00000357376 NLGN3Q9NZ94 848 aa6.44□□□□□ -1.38
RTN4-203ENST00000357376 SLC7A7Q9UM01 511 aa6.44□□□□□ -1.38
RTN4-203ENST00000357376 CACNA1CQ13936 2221 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 CARNS1A5YM72 827 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ZSCAN5BA6NJL1 495 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 HMGN4O00479 90 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 TMPRSS11DO60235 418 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 UBXN7O94888 489 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 MT-ND5P03915 603 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ACP2P11117 423 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 DRD5P21918 477 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 DDX6P26196 483 aaKnown RBP eCLIP6.43□□□□□ -1.384e-30■□□□□ 10.7
RTN4-203ENST00000357376 ELOAQ14241 798 aaKnown RBP6.43□□□□□ -1.38
RTN4-203ENST00000357376 PDGFRLQ15198 375 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 NNATQ16517 81 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 NTRK2Q16620 822 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 CDKN3Q16667 212 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ODF4Q2M2E3 257 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ZER1Q7Z7L7 766 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 CCDC190Q86UF4 302 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ACOT4Q8N9L9 421 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 PLA2G15Q8NCC3 412 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 IL17RDQ8NFM7 739 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 LRRC20Q8TCA0 184 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ZNF296Q8WUU4 475 aaPredicted RBP6.43□□□□□ -1.38
RTN4-203ENST00000357376 PCNPQ8WW12 178 aaKnown RBP6.43□□□□□ -1.38
RTN4-203ENST00000357376 ARRDC3Q96B67 414 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 DNAJA3Q96EY1 480 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 SLC41A3Q96GZ6 507 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 TMEM106CQ9BVX2 250 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 MS4A8Q9BY19 250 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 PPIL3Q9H2H8 161 aaKnown RBP6.43□□□□□ -1.38
RTN4-203ENST00000357376 DPEP2Q9H4A9 486 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ZSCAN32Q9NX65 697 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 MARK1Q9P0L2 795 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 NDRG2Q9UN36 371 aaKnown RBP6.43□□□□□ -1.38
RTN4-203ENST00000357376 NTNG1Q9Y2I2 539 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 NOX1Q9Y5S8 564 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ALG5Q9Y673 324 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 COLEC10Q9Y6Z7 277 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 WDR90Q96KV7 1748 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 A0A1B0GVT2 93 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ANTXRLA6NF34 631 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 GABRPO00591 440 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 MID1O15344 667 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 B3GALT2O43825 422 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 CCL5P13501 91 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 DRD2P14416 443 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ZNF3P17036 446 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 CEBPBP17676 345 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ACVR2AP27037 513 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ACADLP28330 430 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 SOX18P35713 384 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 SLC1A3P43003 542 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 RAB28P51157 221 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 RPA4Q13156 261 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 PUM1Q14671 1186 aaKnown RBP eCLIP6.43□□□□□ -1.38
RTN4-203ENST00000357376 TCTN1Q2MV58 587 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 PPP2R2DQ66LE6 453 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 C18orf63Q68DL7 685 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ANKRD54Q6NXT1 300 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ENPP7Q6UWV6 458 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 RTL4Q6ZR62 310 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 FAM83HQ6ZRV2 1179 aaPredicted RBP6.43□□□□□ -1.38
RTN4-203ENST00000357376 ZNF438Q7Z4V0 828 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 PIAS4Q8N2W9 510 aaPredicted RBP6.43□□□□□ -1.38
RTN4-203ENST00000357376 SLC7A6Q92536 515 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 TM9SF4Q92544 642 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 OR2A14Q96R47 310 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ALG8Q9BVK2 526 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ZNF717Q9BY31 904 aaPredicted RBP6.43□□□□□ -1.38
RTN4-203ENST00000357376 POLDIP3Q9BY77 421 aaKnown RBP6.43□□□□□ -1.38
RTN4-203ENST00000357376 DNMT3BQ9UBC3 853 aaKnown RBP6.43□□□□□ -1.38
RTN4-203ENST00000357376 GNG8Q9UK08 70 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 DIMT1Q9UNQ2 313 aaKnown RBP6.43□□□□□ -1.38
RTN4-203ENST00000357376 MED31Q9Y3C7 131 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 CENPFP49454 3210 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 TDRD15B5MCY1 1934 aaKnown RBP6.43□□□□□ -1.38
RTN4-203ENST00000357376 RALGAPA2Q2PPJ7 1873 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 A0A0G2JPF8 293 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 HNRNPCL3B7ZW38 293 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 H0YC42 278 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 POLR1CO15160 346 aaPredicted RBP6.43□□□□□ -1.38
RTN4-203ENST00000357376 HBQ1P09105 142 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 HNRNPCL4P0DMR1 293 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 F8A1P23610 371 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 EDNRAP25101 427 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 GRPRP30550 384 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 ZNF234Q14588 700 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 CDK10Q15131 360 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 LTB4RQ15722 352 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 PLK5Q496M5 336 aa6.43□□□□□ -1.38
RTN4-203ENST00000357376 EIPR1Q53HC9 387 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms