RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 ITGA3P26006 1051 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 AQP1P29972 269 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 ADSLP30566 484 aaPredicted RBP3.71□□□□□ -1.82
LIG4-201ENST00000356922 GALNSP34059 522 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 CD96P40200 585 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 SOX3P41225 446 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 CRATP43155 626 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 TRPC1P48995 793 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 CHRNEQ04844 493 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 KCNAB2Q13303 367 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 MYBPC3Q14896 1274 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 TBR1Q16650 682 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 DPY19L1Q2PZI1 675 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 COL28A1Q2UY09 1125 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 ACER2Q5QJU3 275 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 ANXA8L1Q5VT79 327 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 HLA-DQA1Q5Y7H0 255 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 OR5M10Q6IEU7 315 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 HPS6Q86YV9 775 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 DEFB107AQ8IZN7 70 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 BEST3Q8N1M1 668 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 OR14A16Q8NHC5 309 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 RNF217Q8TC41 542 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 ADOQ96SZ5 270 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 THUMPD3Q9BV44 507 aaKnown RBP3.71□□□□□ -1.82
LIG4-201ENST00000356922 PRR14Q9BWN1 585 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 CADM1Q9BY67 442 aaKnown RBP3.71□□□□□ -1.82
LIG4-201ENST00000356922 ZNF71Q9NQZ8 489 aaPredicted RBP3.71□□□□□ -1.82
LIG4-201ENST00000356922 DEPPQ9NTK1 212 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 RLIMQ9NVW2 624 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 GIN1Q9NXP7 522 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 STMN3Q9NZ72 180 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 EGFL7Q9UHF1 273 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 UBR5O95071 2799 aaPredicted RBP3.71□□□□□ -1.82
LIG4-201ENST00000356922 DNAJC13O75165 2243 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 NCKAP5O14513 1909 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 PINLYPA6NC86 204 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 PRAMEF25A6NGN4 478 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 TPST1O60507 370 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 NEURL1O76050 574 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 PDE5AO76074 875 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 KCNK2O95069 426 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 NKX2-2O95096 273 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 KCNH1O95259 989 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 SERPINA7P05543 415 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 ESRRAP11474 423 aaPredicted RBP3.71□□□□□ -1.82
LIG4-201ENST00000356922 NCALDP61601 193 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 VAC14Q08AM6 782 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 TRMT5Q32P41 509 aaKnown RBP3.71□□□□□ -1.82
LIG4-201ENST00000356922 NDUFAF6Q330K2 333 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 IL20RBQ6UXL0 311 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 RNF111Q6ZNA4 994 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 TSPYL5Q86VY4 417 aaPredicted RBP3.71□□□□□ -1.82
LIG4-201ENST00000356922 RPS19BP1Q86WX3 136 aaKnown RBP3.71□□□□□ -1.82
LIG4-201ENST00000356922 CALHM3Q86XJ0 350 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 BCORP1Q8N888 145 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 OR10G3Q8NGC4 313 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 M1APQ8TC57 530 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 GPR151Q8TDV0 419 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 TSPEARQ8WU66 669 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 SNRNP27Q8WVK2 155 aaKnown RBP3.71□□□□□ -1.82
LIG4-201ENST00000356922 CMTM5Q96DZ9 223 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 RMND5BQ96G75 393 aaPredicted RBP3.71□□□□□ -1.82
LIG4-201ENST00000356922 NODALQ96S42 347 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 SDF2Q99470 211 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 EFCAB1Q9HAE3 211 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 GALNT9Q9HCQ5 603 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 LUZP4Q9P127 313 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 TMEM181Q9P2C4 612 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 CD300AQ9UGN4 299 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 ALPK2Q86TB3 2170 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 BLACEA4D250 179 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 ZNF891A8MT65 544 aaPredicted RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 SLC22A2O15244 555 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 OIP5O43482 229 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 SEMA7AO75326 666 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 CHI3L1P36222 383 aaPredicted RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 RPL3P39023 403 aaKnown RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 RFC3P40938 356 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 PPICP45877 212 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 CLCN2P51788 898 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 MLF1P58340 268 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 PSME3P61289 254 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 KCNJ2P63252 427 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 STX5Q13190 355 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 LY6DQ14210 128 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 ZNF791Q3KP31 576 aaPredicted RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 ASRGL1Q7L266 308 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 C10orf67Q8IYJ2 551 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 ARMC10Q8N2F6 343 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 FAM86B1Q8N7N1 296 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 VMP1Q96GC9 406 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 BBC3Q96PG8 261 aaPredicted RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 BTBD9Q96Q07 612 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 EFHD1Q9BUP0 239 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 DEFB126Q9BYW3 111 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 SLC38A1Q9H2H9 487 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 CACYBPQ9HB71 228 aaKnown RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 ATP13A2Q9NQ11 1180 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 GPR83Q9NYM4 423 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms