RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 VEGFCP49767 419 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 MMP15P51511 669 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 OR10A3P58181 314 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 SEC61A1P61619 476 aaKnown RBP7.4□□□□□ -1.23
CD46-203ENST00000354848 CDK5Q00535 292 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 EFEMP1Q12805 493 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 CHIT1Q13231 466 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 FGL2Q14314 439 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 MELKQ14680 651 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 SLC5A12Q1EHB4 618 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 SWI5Q1ZZU3 235 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 ZNF791Q3KP31 576 aaPredicted RBP7.4□□□□□ -1.23
CD46-203ENST00000354848 MINDY4Q4G0A6 757 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 ARMC12Q5T9G4 340 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 SLC22A10Q63ZE4 541 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 CXorf57Q6NSI4 855 aaKnown RBP7.4□□□□□ -1.23
CD46-203ENST00000354848 TRIM40Q6P9F5 258 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 TMEM88Q6PEY1 159 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 TECPR1Q7Z6L1 1165 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 SPICQ8N5J4 248 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 CAMKVQ8NCB2 501 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 FBXO15Q8NCQ5 510 aaPredicted RBP7.4□□□□□ -1.23
CD46-203ENST00000354848 OR1M1Q8NGA1 313 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 OR4F15Q8NGB8 312 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 GOT1L1Q8NHS2 421 aaPredicted RBP7.4□□□□□ -1.23
CD46-203ENST00000354848 TRMT10AQ8TBZ6 339 aaKnown RBP7.4□□□□□ -1.23
CD46-203ENST00000354848 SPRYD4Q8WW59 207 aaPredicted RBP7.4□□□□□ -1.23
CD46-203ENST00000354848 THAP4Q8WY91 577 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 MRPS31Q92665 395 aaKnown RBP7.4□□□□□ -1.23
CD46-203ENST00000354848 KCTD12Q96CX2 325 aaKnown RBP7.4□□□□□ -1.23
CD46-203ENST00000354848 FAIM2Q9BWQ8 316 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 RSPO3Q9BXY4 272 aaPredicted RBP7.4□□□□□ -1.23
CD46-203ENST00000354848 ARL6Q9H0F7 186 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 ABCG4Q9H172 646 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 MVB12BQ9H7P6 319 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 EQTNQ9NQ60 294 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 GSN-AS1Q9NRJ2 163 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 PTGFRNQ9P2B2 879 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 CLEC4AQ9UMR7 237 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 ANGPT4Q9Y264 503 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 PRKAB1Q9Y478 270 aa7.4□□□□□ -1.23
CD46-203ENST00000354848 ARHGEF33A8MVX0 844 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 PRR23D1E9PI22 279 aaPredicted RBP7.39□□□□□ -1.23
CD46-203ENST00000354848 SGCEO43556 437 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 EIF3GO75821 320 aaKnown RBP eCLIP7.39□□□□□ -1.23
CD46-203ENST00000354848 SNAPC5O75971 98 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 ATG12O94817 140 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 ACAA1P09110 424 aaPredicted RBP7.39□□□□□ -1.23
CD46-203ENST00000354848 PRR23D2P0DMB1 279 aaPredicted RBP7.39□□□□□ -1.23
CD46-203ENST00000354848 MST1P26927 711 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 RPL9P32969 192 aaKnown RBP7.39□□□□□ -1.23
CD46-203ENST00000354848 ASMTP46597 345 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 KLF9Q13886 244 aaPredicted RBP7.39□□□□□ -1.23
CD46-203ENST00000354848 MBTPS1Q14703 1052 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 METTL11BQ5VVY1 283 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 SFRP4Q6FHJ7 346 aaPredicted RBP7.39□□□□□ -1.23
CD46-203ENST00000354848 SLC30A6Q6NXT4 461 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 SFXN4Q6P4A7 337 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 GSG1LQ6UXU4 331 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 SLC36A4Q6YBV0 504 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 RBM45Q8IUH3 476 aaKnown RBP7.39□□□□□ -1.23
CD46-203ENST00000354848 OR51Q1Q8NH59 317 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 GNPDA2Q8TDQ7 276 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 SFT2D1Q8WV19 159 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 PIGKQ92643 395 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 TEFMQ96QE5 360 aaKnown RBP7.39□□□□□ -1.23
CD46-203ENST00000354848 MTG2Q9H4K7 406 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 DPP7Q9UHL4 492 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 ST3GAL5Q9UNP4 418 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 MYO10Q9HD67 2058 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 OR2M5A3KFT3 312 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 MGAT4DA6NG13 374 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 CASTOR2A6NHX0 329 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 SLC9B1P1A6NJY1 282 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 CHST10O43529 356 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 PRAF2O60831 178 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 NME6O75414 186 aaPredicted RBP7.39□□□□□ -1.23
CD46-203ENST00000354848 RGS9O75916 674 aaPredicted RBP7.39□□□□□ -1.23
CD46-203ENST00000354848 ETHE1O95571 254 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 ECDO95905 644 aaPredicted RBP7.39□□□□□ -1.23
CD46-203ENST00000354848 TBX18O95935 607 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 EGFP01133 1207 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 EPHX1P07099 455 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 CD22P20273 847 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 MMP11P24347 488 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 SLC6A12P48065 614 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 SLC6A11P48066 632 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 RAP2BP61225 183 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 ACSM1Q08AH1 577 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 LRRC74AQ0VAA2 488 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 UBXN2BQ14CS0 331 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 RPS26P11Q5JNZ5 115 aaPredicted RBP7.39□□□□□ -1.23
CD46-203ENST00000354848 ZNF660Q6AZW8 331 aaPredicted RBP7.39□□□□□ -1.23
CD46-203ENST00000354848 MTFR2Q6P444 385 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 SAMD7Q7Z3H4 446 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 KLBQ86Z14 1044 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 ADGRG2Q8IZP9 1017 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 CFAP52Q8N1V2 620 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 GPR32P1Q8NGA4 272 aa7.39□□□□□ -1.23
CD46-203ENST00000354848 ZNF649Q9BS31 505 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms