RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 RTCAO00442 366 aaKnown RBP8.07□□□□□ -1.12
TRIM55-204ENST00000353317 PLD2O14939 933 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 TPST2O60704 377 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 ADAP00813 363 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 TNFP01375 233 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 LSSP48449 732 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 PRDX1Q06830 199 aaKnown RBP8.07□□□□□ -1.12
TRIM55-204ENST00000353317 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRIM55-204ENST00000353317 HYAL2Q12891 473 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 ILKQ13418 452 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 KRT33BQ14525 404 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 NCF4Q15080 339 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 TCTN3Q6NUS6 607 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 TMIGD1Q6UXZ0 262 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 GDPGP1Q6ZNW5 385 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 C17orf64Q86WR6 236 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 PHC2Q8IXK0 858 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 GPR32P1Q8NGA4 272 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 SLC37A2Q8TED4 501 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 UCN3Q969E3 161 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 WDFY2Q96P53 400 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 WFDC6Q9BQY6 131 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 MND1Q9BWT6 205 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 UCK2Q9BZX2 261 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 TWSG1Q9GZX9 223 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 MVB12BQ9H7P6 319 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 CXorf36Q9H7Y0 433 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 LHX9Q9NQ69 397 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 TMEM74BQ9NUR3 256 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 SEC14L4Q9UDX3 406 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 NDOR1Q9UHB4 597 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 STUB1Q9UNE7 303 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 IQCMA0A1B0GVH7 501 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 AGRPO00253 132 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 FOXE1O00358 373 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-204ENST00000353317 OR10H3O60404 316 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 RPN2P04844 631 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 IL3P08700 152 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 ELAVL4P26378 380 aaKnown RBP8.07□□□□□ -1.12
TRIM55-204ENST00000353317 CD38P28907 300 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 FNTBP49356 437 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 DSTNP60981 165 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 DAB2P98082 770 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 ZNF91Q05481 1191 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 LARS2Q15031 903 aaKnown RBP8.07□□□□□ -1.12
TRIM55-204ENST00000353317 GLYR1Q49A26 553 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-204ENST00000353317 TMEM201Q5SNT2 666 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 MEDAGQ5VYS4 303 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 REEP3Q6NUK4 255 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 CEACAM20Q6UY09 585 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 UBE3DQ7Z6J8 389 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 RBM45Q8IUH3 476 aaKnown RBP8.07□□□□□ -1.12
TRIM55-204ENST00000353317 GALNT12Q8IXK2 581 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 CAMKK1Q8N5S9 505 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 NANOGP1Q8N7R0 232 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 TCEANCQ8N8B7 351 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 OR2L3Q8NG85 312 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 SLC38A5Q8WUX1 472 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 REPS1Q96D71 796 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 DEPDC7Q96QD5 511 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 FYTTD1Q96QD9 318 aaKnown RBP8.07□□□□□ -1.12
TRIM55-204ENST00000353317 F2RL3Q96RI0 385 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 TMEM246Q9BRR3 403 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 EFCAB11Q9BUY7 163 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 ABCB9Q9NP78 766 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 MYNNQ9NPC7 610 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 UCKL1Q9NWZ5 548 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 PAQR5Q9NXK6 330 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-204ENST00000353317 CMAHPQ9Y471 501 aa8.07□□□□□ -1.12
TRIM55-204ENST00000353317 A0A0G2JN53 185 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 SH3BP5O60239 455 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 SDC3O75056 442 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 CDRT1O95170 752 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 BCHEP06276 602 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 FHP07954 510 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 CHRM5P08912 532 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-204ENST00000353317 MSL3P1P0C860 447 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 TDGF1P13385 188 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 UBE2IP63279 158 aaKnown RBP8.06□□□□□ -1.12
TRIM55-204ENST00000353317 RUNX1T1Q06455 604 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 ILF3Q12906 894 aaKnown RBP eCLIP8.06□□□□□ -1.12
TRIM55-204ENST00000353317 FLYWCH1Q4VC44 716 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 C12orf73Q69YU5 71 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 TNFAIP8L2Q6P589 184 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-204ENST00000353317 TAF8Q7Z7C8 310 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 PARGQ86W56 976 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 AMIGO1Q86WK6 493 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 HORMAD2Q8N7B1 307 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 GALNT6Q8NCL4 622 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 PROKR2Q8NFJ6 384 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 CADM4Q8NFZ8 388 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 CREB3L4Q8TEY5 395 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 LCN9Q8WX39 176 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 TMEM203Q969S6 136 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 SLC25A46Q96AG3 418 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 DPH7Q9BTV6 452 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 TSSK6Q9BXA6 273 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 MIXL1Q9H2W2 232 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 KLHL31Q9H511 634 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 RERGLQ9H628 205 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms