RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 IFT52Q9Y366 437 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 TPRKBQ9Y3C4 175 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 PCDHGA10Q9Y5H3 936 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 RNF215Q9Y6U7 377 aa6.46□□□□□ -1.38
TRIM55-203ENST00000350034 IGHV1OR21-1A0A087WYE8 117 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 A0A0A6YYC8 382 aaPredicted RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 IGHV5-51A0A0C4DH38 117 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 A0A1B0GVT2 93 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 HYKKA2RU49 373 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 AGAP5A6NIR3 686 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 RHPN2P1A8MT19 583 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 H0YIG0 161 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 TGFBR3LH3BV60 316 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 I3L1I5 382 aaPredicted RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 NUDT21O43809 227 aaKnown RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 KIAA0513O60268 411 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 SDC3O75056 442 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 NKX2-2O95096 273 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 ZBTB11O95625 1053 aaPredicted RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 AK1P00568 194 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 DCNP07585 359 aaKnown RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 ALOX5P09917 674 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 OSMP13725 252 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 EEF1B2P24534 225 aaKnown RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 PCSK6P29122 969 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 GALNSP34059 522 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 KRT20P35900 424 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 GPR3P46089 330 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 AFF3P51826 1226 aaKnown RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 TMBIM6P55061 237 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 C21orf59P57076 290 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 SKP1P63208 163 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 EEF1A1P68104 462 aaKnown RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 CFHR1Q03591 330 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 PIGFQ07326 219 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 COX10Q12887 443 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 PTGES3Q15185 160 aaKnown RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 NEDD8Q15843 81 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 SMN1Q16637 294 aaKnown RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 TCTE1Q5JU00 501 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 SLX4IPQ5VYV7 408 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 CWF19L1Q69YN2 538 aaKnown RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 C12orf73Q69YU5 71 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 C1orf94Q6P1W5 598 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 PODNL1Q6PEZ8 512 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 DGAT2L6Q6ZPD8 337 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 PRSS48Q7RTY5 328 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 KANSL1Q7Z3B3 1105 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 C16orf62Q7Z3J2 963 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 WDR53Q7Z5U6 358 aaPredicted RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 ZER1Q7Z7L7 766 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 WDR5BQ86VZ2 330 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 ERI1Q8IV48 349 aaKnown RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 CCDC103Q8IW40 242 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 SLC35F3Q8IY50 421 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF595Q8IYB9 648 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 TAGAPQ8N103 731 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 DEPDC4Q8N2C3 294 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 CLIP4Q8N3C7 705 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 OR52P1PQ8NH57 321 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 FAR1Q8WVX9 515 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 GTPBP3Q969Y2 492 aaKnown RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 FKBP10Q96AY3 582 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 ISOC1Q96CN7 298 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 ZDHHC12Q96GR4 267 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 LMF2Q9BU23 707 aaKnown RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 FNDC11Q9BVV2 318 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 UCK2Q9BZX2 261 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 LHPPQ9H008 270 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 QRSL1Q9H0R6 528 aaKnown RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 TRIM45Q9H8W5 580 aaPredicted RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 FANCEQ9HB96 536 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 VCX3AQ9NNX9 186 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 PDE7BQ9NP56 450 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 CCNB1IP1Q9NPC3 277 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 PRMT8Q9NR22 394 aaPredicted RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 SCN3BQ9NY72 215 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 LRIT1Q9P2V4 623 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 AASSQ9UDR5 926 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 PSORS1C1Q9UIG5 152 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF443Q9Y2A4 671 aaPredicted RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 WDR45Q9Y484 360 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 DMXL1Q9Y485 3027 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 MN1Q10571 1320 aaPredicted RBP6.45□□□□□ -1.38
TRIM55-203ENST00000350034 MYO15AQ9UKN7 3530 aa6.45□□□□□ -1.38
TRIM55-203ENST00000350034 ANKRD17O75179 2603 aaKnown RBP6.44□□□□□ -1.38
TRIM55-203ENST00000350034 CCDC160A6NGH7 325 aa6.44□□□□□ -1.38
TRIM55-203ENST00000350034 TTC36A6NLP5 189 aa6.44□□□□□ -1.38
TRIM55-203ENST00000350034 PTGES3LE9PB15 166 aa6.44□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF749O43361 778 aa6.44□□□□□ -1.38
TRIM55-203ENST00000350034 KLF4O43474 513 aa6.44□□□□□ -1.38
TRIM55-203ENST00000350034 HYAL3O43820 417 aaPredicted RBP6.44□□□□□ -1.38
TRIM55-203ENST00000350034 BRINP1O60477 761 aa6.44□□□□□ -1.38
TRIM55-203ENST00000350034 MPZL2O60487 215 aa6.44□□□□□ -1.38
TRIM55-203ENST00000350034 FAM20BO75063 409 aa6.44□□□□□ -1.38
TRIM55-203ENST00000350034 COQ9O75208 318 aa6.44□□□□□ -1.38
TRIM55-203ENST00000350034 STX11O75558 287 aa6.44□□□□□ -1.38
TRIM55-203ENST00000350034 TRMUO75648 421 aaKnown RBP6.44□□□□□ -1.38
TRIM55-203ENST00000350034 UGT2B17O75795 530 aa6.44□□□□□ -1.38
TRIM55-203ENST00000350034 CYP7B1O75881 506 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms