RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 GNSP15586 552 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 TCEA1P23193 301 aaKnown RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 HOXD12P35452 270 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ETV6P41212 452 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 PCYT1AP49585 367 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 CSNK2BP67870 215 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 DLX2Q07687 328 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 GLYR1Q49A26 553 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 TOR1AIP1Q5JTV8 583 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 LINC00299Q6ZSB3 139 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF438Q7Z4V0 828 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 NUDT13Q86X67 352 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 DEPDC4Q8N2C3 294 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 RFLNBQ8N5W9 214 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 POGLUT1Q8NBL1 392 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 OR5T3Q8NGG3 340 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 OR9Q1Q8NGQ5 310 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 SUSD6Q92537 303 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 FCGR1BQ92637 280 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 DIO2Q92813 273 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 SLC35G5Q96KT7 338 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 PELI2Q9HAT8 420 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 SMURF1Q9HCE7 757 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 B3GAT2Q9NPZ5 323 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ATP13A2Q9NQ11 1180 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 STARD5Q9NSY2 213 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 EVA1BQ9NVM1 165 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 TAS2R7Q9NYW3 318 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 CNOT2Q9NZN8 540 aaKnown RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 TMA7Q9Y2S6 64 aaKnown RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 GPSM3Q9Y4H4 160 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 CSNK1G3Q9Y6M4 447 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 HTR3EA5X5Y0 456 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 TAF4O00268 1085 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 TBX19O60806 448 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 CSF2P04141 144 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 HNRNPA1P09651 372 aaKnown RBP eCLIP5.65□□□□□ -1.5
CLCN3-201ENST00000347613 ENDOUP21128 410 aaKnown RBP5.65□□□□□ -1.5
CLCN3-201ENST00000347613 PKLRP30613 574 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 GPC1P35052 558 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 KIR2DL1P43626 348 aaPredicted RBP5.65□□□□□ -1.5
CLCN3-201ENST00000347613 PSPHP78330 225 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 SIM1P81133 766 aaPredicted RBP5.65□□□□□ -1.5
CLCN3-201ENST00000347613 RUNX2Q13950 521 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 RPE65Q16518 533 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF181Q2M3W8 571 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 GPAT3Q53EU6 434 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 CCDC92Q53HC0 331 aaPredicted RBP5.65□□□□□ -1.5
CLCN3-201ENST00000347613 FAM27D1Q5T7N8 215 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 SIRT6Q8N6T7 355 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 OR52P1PQ8NH57 321 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 CDS1Q92903 461 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 TSACCQ96A04 125 aaPredicted RBP5.65□□□□□ -1.5
CLCN3-201ENST00000347613 ELP4Q96EB1 424 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 KATNB1Q9BVA0 655 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 SRRQ9GZT4 340 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 TOR4AQ9NXH8 423 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 MALT1Q9UDY8 824 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 UGT2A1Q9Y4X1 527 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 CFAP47Q6ZTR5 3102 aa5.65□□□□□ -1.5
CLCN3-201ENST00000347613 PCNX3Q9H6A9 2034 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 A0A1W2PQ09 198 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 A0A1W2PQU0 124 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 HYKKA2RU49 373 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 SH3D21A4FU49 640 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 EFCAB10A6NFE3 127 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 C4orf47A7E2U8 309 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 E9PI62 339 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 C5orf67F2Z3F1 127 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 FAAHO00519 579 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 PEX12O00623 359 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 SNPHO15079 494 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 CASC3O15234 703 aaKnown RBP5.65□□□□□ -1.51
CLCN3-201ENST00000347613 RGS5O15539 181 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 KDM1AO60341 852 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 LDB3O75112 727 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 UGT2B17O75795 530 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 CSF3P09919 207 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 SLC35G4P0C7Q5 338 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 ZNF888P0CJ79 500 aaPredicted RBP5.65□□□□□ -1.51
CLCN3-201ENST00000347613 PIPP12273 146 aaPredicted RBP5.65□□□□□ -1.51
CLCN3-201ENST00000347613 PVRP15151 417 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 HOXB6P17509 224 aaKnown RBP5.65□□□□□ -1.51
CLCN3-201ENST00000347613 APEX1P27695 318 aaKnown RBP5.65□□□□□ -1.51
CLCN3-201ENST00000347613 HTR2AP28223 471 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 HCCSP53701 268 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 BTN3A2P78410 334 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 RHAGQ02094 409 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 HNRNPA0Q13151 305 aaKnown RBP5.65□□□□□ -1.51
CLCN3-201ENST00000347613 GPR50Q13585 617 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 RUNX3Q13761 415 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 LARS2Q15031 903 aaKnown RBP5.65□□□□□ -1.51
CLCN3-201ENST00000347613 NCF4Q15080 339 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 TMEM196Q5HYL7 178 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 ENTPD8Q5MY95 495 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 FAM92BQ6ZTR7 304 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 USP30Q70CQ3 517 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 RD3Q7Z3Z2 195 aa5.65□□□□□ -1.51
CLCN3-201ENST00000347613 ZNF761Q86XN6 746 aaPredicted RBP5.65□□□□□ -1.51
CLCN3-201ENST00000347613 FAM26EQ8N5C1 309 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms