RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SUCOQ9UBS9 1254 aaKnown RBP17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 POMPQ9Y244 141 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 CEP295Q9C0D2 2601 aa17.56■□□□□ 0.4
CHMP4A-201ENST00000347519 ZFHX4Q86UP3 3567 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 APC2O95996 2303 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 ZNF891A8MT65 544 aaPredicted RBP17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 ACOT8O14734 319 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 KCNK2O95069 426 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 SERPINA7P05543 415 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 NR2F1P10589 423 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 GGT1P19440 569 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 ATP6V1B2P21281 511 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 AQP1P29972 269 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 EIF2S3P41091 472 aaKnown RBP17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 ANXA11P50995 505 aaKnown RBP17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 POU6F2P78424 691 aaPredicted RBP17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 MRPS22P82650 360 aaKnown RBP17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 RBBP4Q09028 425 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 CDC20Q12834 499 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 TRIM25Q14258 630 aaKnown RBP17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 ZNF630Q2M218 657 aaPredicted RBP17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 ARHGAP11BQ3KRB8 267 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 DCST2Q5T1A1 773 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 HLA-DQA1Q5Y7H0 255 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 DESI1Q6ICB0 168 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 ERICH5Q6P6B1 374 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 C16orf62Q7Z3J2 963 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 HMGN2P46Q86SG4 172 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 PTRH1Q86Y79 214 aaKnown RBP17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 SPACA3Q8IXA5 215 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 BCORP1Q8N888 145 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 FAM110BQ8TC76 370 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 WDR60Q8WVS4 1066 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 PSMF1Q92530 271 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 VPS50Q96JG6 964 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 RSPO3Q9BXY4 272 aaPredicted RBP17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 Q9N2J8 555 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 EXD2Q9NVH0 621 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 CBLCQ9ULV8 474 aa17.55■□□□□ 0.4
CHMP4A-201ENST00000347519 ARGFXA6NJG6 315 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 TTC36A6NLP5 189 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 A8MUI8 341 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 C1QTNF9BB2RNN3 333 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 CXCR6O00574 342 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 ARPC2O15144 300 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 TO15178 435 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 FCMRO60667 390 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 H6PDO95479 791 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 C1QTNF9P0C862 333 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 PIGAP37287 484 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 CRYBA2P53672 197 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 DCAF7P61962 342 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 CHRNEQ04844 493 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 GPAT3Q53EU6 434 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 ATAD3BQ5T9A4 648 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 GLYATQ6IB77 296 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 KBTBD2Q8IY47 623 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 FAM13CQ8NE31 585 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 FIG4Q92562 907 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 TMBIM1Q969X1 311 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 TP53INP1Q96A56 240 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 SLC38A1Q9H2H9 487 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 THUMPD1Q9NXG2 353 aaKnown RBP17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 OR10H1Q9Y4A9 318 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 SNX13Q9Y5W8 968 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 CELSR3Q9NYQ7 3312 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 CFAP47Q6ZTR5 3102 aa17.54■□□□□ 0.4
CHMP4A-201ENST00000347519 NPIPA5A0A0B4J1W7 369 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 CFAP73A6NFT4 308 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 NPIPA7E9PJI5 369 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 GSTA4O15217 222 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 PGM3O95394 542 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 AGR2O95994 175 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 NPIPA8P0DM63 369 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 ICAM2P13598 275 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 RFX3P48380 749 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 PCBP3P57721 371 aaKnown RBP17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 BNIP2Q12982 314 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 VEZF1Q14119 521 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 B3GNTL1Q67FW5 361 aaPredicted RBP17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 TYW3Q6IPR3 259 aaKnown RBP17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 REEP3Q6NUK4 255 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 H3F3CQ6NXT2 135 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 LYPD8Q6UX82 237 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 CYP2R1Q6VVX0 501 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 FRRS1Q6ZNA5 592 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 SIRT6Q8N6T7 355 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 HIPK4Q8NE63 616 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 C17orf47Q8NEP4 570 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 OR5L2Q8NGL0 311 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 BRIX1Q8TDN6 353 aaKnown RBP17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 THAP4Q8WY91 577 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 ZG16BQ96DA0 208 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 ASB9Q96DX5 294 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 THOC3Q96J01 351 aaKnown RBP17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 DCBLD2Q96PD2 775 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 TRNT1Q96Q11 434 aaKnown RBP17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 RAB3IPQ96QF0 476 aaPredicted RBP17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 TREX2Q9BQ50 279 aaPredicted RBP17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 CDCP1Q9H5V8 836 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms