RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 SMSP52788 366 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 RGS1Q08116 209 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 ZNF181Q2M3W8 571 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 CLEC12AQ5QGZ9 265 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 MRGPREQ86SM8 312 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 LRRC25Q8N386 305 aaPredicted RBP14.44□□□□□ -0.1
UPF3B-202ENST00000345865 OR52P1PQ8NH57 321 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 ADAMTS15Q8TE58 950 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 PATE1Q8WXA2 126 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 SLC9A6Q92581 669 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 HTRA1Q92743 480 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 MRPL38Q96DV4 380 aaKnown RBP14.44□□□□□ -0.1
UPF3B-202ENST00000345865 WDR92Q96MX6 357 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 TWSG1Q9GZX9 223 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 NUAK2Q9H093 628 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 NTMQ9P121 344 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 MRPS2Q9Y399 296 aaKnown RBP14.44□□□□□ -0.1
UPF3B-202ENST00000345865 UGT2A1Q9Y4X1 527 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 KNL1Q8NG31 2342 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 VCANP13611 3396 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 ISPDA4D126 451 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 KDM1AO60341 852 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 RASGRP1O95267 797 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 ACADMP11310 421 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 SPNP16150 400 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 UGT2B7P16662 529 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 POLR2CP19387 275 aaPredicted RBP14.44□□□□□ -0.1
UPF3B-202ENST00000345865 NDUFS1P28331 727 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 SOX6P35712 828 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 ETV6P41212 452 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 ID2Q02363 134 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 TSPAN31Q12999 210 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 MLLT11Q13015 90 aaPredicted RBP14.44□□□□□ -0.1
UPF3B-202ENST00000345865 TRAM2Q15035 370 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 OR2G6Q5TZ20 316 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 ZNF730Q6ZMV8 503 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 PRSS41Q7RTY9 318 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 EGFL6Q8IUX8 553 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 POC5Q8NA72 575 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 ASB12Q8WXK4 309 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 ANKMY1Q9P2S6 941 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 ZNF229Q9UJW7 825 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 PCDHGB6Q9Y5F9 930 aa14.44□□□□□ -0.1
UPF3B-202ENST00000345865 ZNF860A6NHJ4 632 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 SAGE2PA6NJ88 616 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 UBXN7O94888 489 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 RAB36O95755 333 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 SLC35G6P0C7Q6 338 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 GSTM3P21266 225 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 PRKAR1BP31321 381 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 DUSP5Q16690 384 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 FAM214AQ32MH5 1076 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 TRMT12Q53H54 448 aaKnown RBP14.43□□□□□ -0.1
UPF3B-202ENST00000345865 ATAD3BQ5T9A4 648 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 TYW3Q6IPR3 259 aaKnown RBP14.43□□□□□ -0.1
UPF3B-202ENST00000345865 CDC73Q6P1J9 531 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 SLC27A4Q6P1M0 643 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 TMEM92Q6UXU6 159 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 SHFQ7M4L6 423 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 OR10G6Q8NH81 332 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 TMEM163Q8TC26 289 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 GNPDA2Q8TDQ7 276 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 TM9SF4Q92544 642 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 PILRAQ9UKJ1 303 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 DAPP1Q9UN19 280 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 BRWD1Q9NSI6 2320 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 PLD2O14939 933 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 MYL12BO14950 172 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 TNFSF14O43557 240 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 KCNK2O95069 426 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 CCNYL3P0C7X3 344 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 ALOX12P18054 663 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 PSMA1P25786 263 aaKnown RBP14.43□□□□□ -0.1
UPF3B-202ENST00000345865 LSSP48449 732 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 ST3GAL3Q11203 375 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 CDC20Q12834 499 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 GPR18Q14330 331 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 PUS10Q3MIT2 529 aaKnown RBP14.43□□□□□ -0.1
UPF3B-202ENST00000345865 CCNJQ5T5M9 372 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 USP30Q70CQ3 517 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 OR2L13Q8N349 312 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 TEX47Q8TBZ9 253 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 MS4A4EQ96PG1 132 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 SP140LQ9H930 580 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 SACM1LQ9NTJ5 587 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 CALML5Q9NZT1 146 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 SEC14L4Q9UDX3 406 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 SLC13A4Q9UKG4 626 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 STUB1Q9UNE7 303 aa14.43□□□□□ -0.1
UPF3B-202ENST00000345865 YARS2Q9Y2Z4 477 aaKnown RBP14.43□□□□□ -0.1
UPF3B-202ENST00000345865 PNMA8CA0A1B0GUJ8 204 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 HYKKA2RU49 373 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 GSAPA4D1B5 854 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 OR6C74A6NCV1 312 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 PIP5K1CO60331 668 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 CH25HO95992 272 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 ACP2P11117 423 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 PVRP15151 417 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 GNSP15586 552 aa14.42□□□□□ -0.1
UPF3B-202ENST00000345865 NDUFV2P19404 249 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms