RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PNLIPRP2P54317 469 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 CORO7P57737 925 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 PSG6Q00889 435 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 C19orf57Q0VDD7 668 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 DUSP8Q13202 625 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 LASP1Q14847 261 aaKnown RBP10.91□□□□□ -0.66
SNCA-202ENST00000345009 NNATQ16517 81 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 NTRK2Q16620 822 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 ZNF791Q3KP31 576 aaPredicted RBP10.91□□□□□ -0.66
SNCA-202ENST00000345009 NADK2Q4G0N4 442 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 SOWAHCQ53LP3 525 aaPredicted RBP10.91□□□□□ -0.66
SNCA-202ENST00000345009 CT45A2Q5DJT8 189 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 TBCELQ5QJ74 424 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 ATAD3BQ5T9A4 648 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 ZNF468Q5VIY5 522 aaPredicted RBP10.91□□□□□ -0.66
SNCA-202ENST00000345009 CDC73Q6P1J9 531 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 ANGPTL8Q6UXH0 198 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 PSD4Q8NDX1 1056 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 SIMC1Q8NDZ2 872 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 C10orf82Q8WW14 230 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 VPS33AQ96AX1 596 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 OMA1Q96E52 524 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 SIGLEC12Q96PQ1 595 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 STACQ99469 402 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 SLC35A5Q9BS91 424 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 G6PC3Q9BUM1 346 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 RAD21L1Q9H4I0 556 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 SAR1AQ9NR31 198 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 KLHL1Q9NR64 748 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 DUSP22Q9NRW4 184 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 AGPAT4Q9NRZ5 378 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 EXD2Q9NVH0 621 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 LEF1Q9UJU2 399 aaPredicted RBP10.91□□□□□ -0.66
SNCA-202ENST00000345009 CBLCQ9ULV8 474 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 DTX4Q9Y2E6 619 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 NDUFAF1Q9Y375 327 aa10.91□□□□□ -0.66
SNCA-202ENST00000345009 TNRC6AQ8NDV7 1962 aaKnown RBP10.9□□□□□ -0.66
SNCA-202ENST00000345009 CFAP46Q8IYW2 2715 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 B8ZZF3 427 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 NME2P1O60361 137 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 NKX2-2O95096 273 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 NADKO95544 446 aaPredicted RBP10.9□□□□□ -0.66
SNCA-202ENST00000345009 CNR1P21554 472 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 MATN1P21941 496 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 NME2P22392 152 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 PPIBP23284 216 aaKnown RBP10.9□□□□□ -0.66
SNCA-202ENST00000345009 LCN1P31025 176 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 STX5Q13190 355 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 GAB1Q13480 694 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 MMEL1Q495T6 779 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 GKAP1Q5VSY0 366 aaPredicted RBP10.9□□□□□ -0.66
SNCA-202ENST00000345009 GK5Q6ZS86 529 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 FUNDC1Q8IVP5 155 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 COX18Q8N8Q8 333 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 POGLUT1Q8NBL1 392 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 OR5M3Q8NGP4 307 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 OR5AK3PQ8NH89 298 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 DIO2Q92813 273 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 HOXB13Q92826 284 aaPredicted RBP10.9□□□□□ -0.66
SNCA-202ENST00000345009 TMBIM1Q969X1 311 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 NEURL3Q96EH8 262 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 DTNBP1Q96EV8 351 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 SCMH1Q96GD3 660 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 SLC35G5Q96KT7 338 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 BBC3Q96PG8 261 aaPredicted RBP10.9□□□□□ -0.66
SNCA-202ENST00000345009 BTBD2Q9BX70 525 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 PIGUQ9H490 435 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 ZNF385DQ9H6B1 395 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 THUMPD1Q9NXG2 353 aaKnown RBP10.9□□□□□ -0.66
SNCA-202ENST00000345009 ARL2BPQ9Y2Y0 163 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 CAPN7Q9Y6W3 813 aa10.9□□□□□ -0.66
SNCA-202ENST00000345009 NBASA2RRP1 2371 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 A0A096LPI6 279 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 ANKRD33BA6NCL7 494 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 TMEM247A6NEH6 219 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 PEX1O43933 1283 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 SNX4O95219 450 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 ZIC2O95409 532 aaPredicted RBP10.89□□□□□ -0.67
SNCA-202ENST00000345009 FAM107AO95990 144 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 AK1P00568 194 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 HPGDP15428 266 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 ATP6V1C1P21283 382 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 PIGAP37287 484 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 KHKP50053 298 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 FBXW4P57775 412 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 KCNJ2P63252 427 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 POU6F2P78424 691 aaPredicted RBP10.89□□□□□ -0.67
SNCA-202ENST00000345009 KLF10Q13118 480 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 SNTA1Q13424 505 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 FAM180AQ6UWF9 173 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 GALNTL5Q7Z4T8 443 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 MDGA2Q7Z553 956 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 PRR22Q8IZ63 422 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 BCORP1Q8N888 145 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 ANKS4BQ8N8V4 417 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 PCYOX1LQ8NBM8 494 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 SLC16A11Q8NCK7 471 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 OR10G3Q8NGC4 313 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 MIPOL1Q8TD10 442 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms