RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 PATE1Q8WXA2 126 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 SARGQ9BW04 601 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 BARHL1Q9BZE3 327 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 LYARQ9NX58 379 aaKnown RBP13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 YARS2Q9Y2Z4 477 aaKnown RBP13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 PCDHGB6Q9Y5F9 930 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 PIP5K1CO60331 668 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 CRYBB2P43320 205 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 TRAM2Q15035 370 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 ENTPD8Q5MY95 495 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 SLC30A6Q6NXT4 461 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 SLC27A4Q6P1M0 643 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 FBXO42Q6P3S6 717 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 CD300LDQ6UXZ3 194 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 RNFT2Q96EX2 444 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 GABRG3Q99928 467 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 TOR4AQ9NXH8 423 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 GIN1Q9NXP7 522 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 SPIN1Q9Y657 262 aaPredicted RBP13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 VPS13AQ96RL7 3174 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 CFAP54Q96N23 3096 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 CENPVL1A0A0U1RR11 272 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 ACADMP11310 421 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 PVRP15151 417 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 GNSP15586 552 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 DLX2Q07687 328 aaPredicted RBP13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 NFATC4Q14934 902 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 TRIM69Q86WT6 500 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 PHC2Q8IXK0 858 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 FRMD1Q8N878 549 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 ZBTB8BQ8NAP8 495 aaPredicted RBP13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 PROKR2Q8NFJ6 384 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 OR9Q1Q8NGQ5 310 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 DIO2Q92813 273 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 ARSGQ96EG1 525 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 SCARF2Q96GP6 870 aaPredicted RBP13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 C10orf90Q96M02 699 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 ARHGDIGQ99819 225 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 SMURF1Q9HCE7 757 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 ANKMY1Q9P2S6 941 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 STUB1Q9UNE7 303 aa13.94□□□□□ -0.18
VIPAS39-202ENST00000343765 LOC105369274A0A096LPK9 316 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 LOC102723532A0A0G2JNH3 316 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 OR6C74A6NCV1 312 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 AP3D1O14617 1153 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 MYL12AP19105 171 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 GSTM3P21266 225 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 TNFRSF17Q02223 184 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 RUNX2Q13950 521 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 FAM214AQ32MH5 1076 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 MFSD12Q6NUT3 480 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 PRSS41Q7RTY9 318 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 SFTPA2Q8IWL1 248 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 OR4N4Q8N0Y3 316 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 LINC00471Q8N535 108 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 GNPDA2Q8TDQ7 276 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 TMEM255BQ8WV15 326 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 GATAD2BQ8WXI9 593 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 BMFQ96LC9 184 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 WDR92Q96MX6 357 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 KLHL28Q9NXS3 571 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 SEC14L4Q9UDX3 406 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 KLHL3Q9UH77 587 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 KLF15Q9UIH9 416 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 DIMT1Q9UNQ2 313 aaKnown RBP13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 ISPDA4D126 451 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 LOC110117498-PIK3R3F6TDL0 507 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 PLD2O14939 933 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 AQP9O43315 295 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 UBXN7O94888 489 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 UGT2B7P16662 529 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 CTHP32929 405 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 ST3GAL3Q11203 375 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 GPR68Q15743 365 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 FLYWCH1Q4VC44 716 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 TRIM48Q8IWZ4 208 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 NRMQ8IXM6 262 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 ZFP41Q8N8Y5 198 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 TMEM163Q8TC26 289 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 OTULINQ96BN8 352 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 CDCA3Q99618 268 aaPredicted RBP13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 MCHR1Q99705 422 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 ADAP2Q9NPF8 381 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 NDUFB11Q9NX14 153 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 SSR3Q9UNL2 185 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 LIPT1Q9Y234 373 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 NCKAP1Q9Y2A7 1128 aa13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 MRPS2Q9Y399 296 aaKnown RBP13.93□□□□□ -0.18
VIPAS39-202ENST00000343765 SYT5O00445 386 aa13.92□□□□□ -0.18
VIPAS39-202ENST00000343765 LDB3O75112 727 aa13.92□□□□□ -0.18
VIPAS39-202ENST00000343765 ATP6V1G1O75348 118 aa13.92□□□□□ -0.18
VIPAS39-202ENST00000343765 AZGP1P25311 298 aaKnown RBP13.92□□□□□ -0.18
VIPAS39-202ENST00000343765 IFNGR2P38484 337 aa13.92□□□□□ -0.18
VIPAS39-202ENST00000343765 TSFMP43897 325 aaKnown RBP13.92□□□□□ -0.18
VIPAS39-202ENST00000343765 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.92□□□□□ -0.18
VIPAS39-202ENST00000343765 MLLT11Q13015 90 aaPredicted RBP13.92□□□□□ -0.18
VIPAS39-202ENST00000343765 MADCAM1Q13477 382 aa13.92□□□□□ -0.18
VIPAS39-202ENST00000343765 DUSP5Q16690 384 aa13.92□□□□□ -0.18
VIPAS39-202ENST00000343765 TRMT12Q53H54 448 aaKnown RBP13.92□□□□□ -0.18
VIPAS39-202ENST00000343765 C22orf42Q6IC83 251 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms