RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ZFYVE21Q9BQ24 234 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 DNMT3AQ9Y6K1 912 aaPredicted RBP6.79□□□□□ -1.32
VCAN-202ENST00000342785 TRBV2A0A0J9YWF9 115 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 HCRTR2O43614 444 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 KRT33AO76009 404 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 FUCA1P04066 466 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 MAPK3P27361 379 aaPredicted RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 SSTR4P31391 388 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 MAGEA8P43361 318 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 ARPC4P59998 168 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 ELOAQ14241 798 aaKnown RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 CTU2Q2VPK5 515 aaKnown RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 BTBD16Q32M84 506 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 C11orf91Q3C1V1 193 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 FAM180AQ6UWF9 173 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 SDR16C5Q8N3Y7 309 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 PLA2G15Q8NCC3 412 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 CENPOQ9BU64 300 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 PINK1Q9BXM7 581 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 PITHD1Q9GZP4 211 aaPredicted RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 TBC1D24Q9ULP9 559 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 MYO10Q9HD67 2058 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 TRBV5-4A0A0C4DH59 114 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 FAM183AA6NL82 134 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 LYRM1O43325 122 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 ZNF81P51508 661 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 CHRNEQ04844 493 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 CNIH2Q6PI25 160 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 TOR1AIP2Q8NFQ8 470 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 RNASE11Q8TAA1 199 aaKnown RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 CHFRQ96EP1 664 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 MS4A4EQ96PG1 132 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 INSM2Q96T92 566 aaPredicted RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 RNF121Q9H920 327 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 OR6C2Q9NZP2 312 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 HCN3Q9P1Z3 774 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 SEC16AO15027 2179 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 H3BNC9 293 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 TLX3O43711 291 aaPredicted RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 SOX30O94993 753 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 CSN2P05814 226 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 SEC23BQ15437 767 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 BCL7AQ4VC05 210 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 TCEAL5Q5H9L2 206 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 ARHGAP11AQ6P4F7 1023 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 RIMKLAQ8IXN7 391 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 OR52E2Q8NGJ4 325 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 MROQ9BYG7 248 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 OR2B2Q9GZK3 357 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 CXXC1Q9P0U4 656 aaPredicted RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 MBD2Q9UBB5 411 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 SLC5A10A0PJK1 596 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 SOX1O00570 391 aaPredicted RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 PRR35P0CG20 571 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 AP2S1P53680 142 aaPredicted RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 NRG3P56975 720 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 TRA2BP62995 288 aaKnown RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 DEFB110Q30KQ9 67 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 FAM71E1Q6IPT2 247 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 XKRXQ6PP77 449 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 ZNF852Q6ZMS4 543 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 VWA5B2Q8N398 1253 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 MMP28Q9H239 520 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 IL21Q9HBE4 155 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 LAMP5Q9UJQ1 280 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 STRCQ7RTU9 1775 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 L7N2F9 121 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 ANXA3P12429 323 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 GP1BBP13224 206 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 TRAM1Q15629 374 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 NKG7Q16617 165 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 AKIRIN2Q53H80 203 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 CCNJQ5T5M9 372 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 ZNF782Q6ZMW2 699 aaPredicted RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 QSOX2Q6ZRP7 698 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 ZNF761Q86XN6 746 aaPredicted RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 LMX1AQ8TE12 382 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 GAL3ST3Q96A11 431 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 G6PC3Q9BUM1 346 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 APOOQ9BUR5 198 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 MS4A8Q9BY19 250 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 DDX31Q9H8H2 851 aaKnown RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 NTN4Q9HB63 628 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 NANSQ9NR45 359 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 MED11Q9P086 117 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 SLC7A7Q9UM01 511 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 NUP214P35658 2090 aaPredicted RBP6.78□□□□□ -1.32
VCAN-202ENST00000342785 FXYD6-FXYD2A0A087WZ82 144 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 PSMD9O00233 223 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 TOXO94900 526 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 GSTT2P0CG29 244 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 IL7P13232 177 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 AHRP35869 848 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 GPR143P51810 404 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 ILKQ13418 452 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 DUSP7Q16829 419 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 SLC25A25Q6KCM7 469 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 NRARPQ7Z6K4 114 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms