RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 USP22Q9UPT9 525 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 WWP2O00308 870 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 TNFSF14O43557 240 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 SNX4O95219 450 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 C1QBP02746 253 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 IL3P08700 152 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 UGT2B7P16662 529 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 FMO3P31513 532 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 RPS15AP62244 130 aaKnown RBP13.8□□□□□ -0.2
PBX3-201ENST00000342287 HHEXQ03014 270 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 LTB4RQ15722 352 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 HDDC2Q7Z4H3 204 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 UBE3DQ7Z6J8 389 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 GPAT4Q86UL3 456 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 GKN2Q86XP6 184 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 TMEFF1Q8IYR6 380 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 CLECL1Q8IZS7 167 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 AURKBQ96GD4 344 aaPredicted RBP13.8□□□□□ -0.2
PBX3-201ENST00000342287 MS4A7Q9GZW8 240 aaPredicted RBP13.8□□□□□ -0.2
PBX3-201ENST00000342287 DDX31Q9H8H2 851 aaKnown RBP13.8□□□□□ -0.2
PBX3-201ENST00000342287 LHX9Q9NQ69 397 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 ING3Q9NXR8 418 aa13.8□□□□□ -0.2
PBX3-201ENST00000342287 PCDHGA9Q9Y5G4 932 aaKnown RBP13.8□□□□□ -0.2
PBX3-201ENST00000342287 LOC100506127A0A0U1RQW1 187 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 C2orf74A8MZ97 194 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 DSCR3O14972 297 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 RAB3AP20336 220 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 BCKDHBP21953 392 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 MASP1P48740 699 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 ARFIP1P53367 373 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 IL5RAQ01344 420 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 SGCAQ16586 387 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 FLYWCH1Q4VC44 716 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 ANKRD34AQ69YU3 496 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 LRFN4Q6PJG9 635 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 UFD1Q92890 307 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 PTP4A1Q93096 173 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 TMBIM1Q969X1 311 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 TM4SF18Q96CE8 201 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 GTPBP2Q9BX10 602 aaKnown RBP13.79□□□□□ -0.2
PBX3-201ENST00000342287 AMBRA1Q9C0C7 1298 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 ABCG4Q9H172 646 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 MIEF1Q9NQG6 463 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 HPF1Q9NWY4 346 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 NAALAD2Q9Y3Q0 740 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 FANCMQ8IYD8 2048 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 ACVR2AP27037 513 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 HYAL2Q12891 473 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 HEPACAMQ14CZ8 416 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 ZNF385BQ569K4 471 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 SYT6Q5T7P8 510 aaPredicted RBP13.79□□□□□ -0.2
PBX3-201ENST00000342287 LIX1LQ8IVB5 337 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 ZNF680Q8NEM1 530 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 DNASE2BQ8WZ79 361 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 FAM120BQ96EK7 910 aaKnown RBP13.79□□□□□ -0.2
PBX3-201ENST00000342287 DUSP15Q9H1R2 295 aaPredicted RBP13.79□□□□□ -0.2
PBX3-201ENST00000342287 SLC6A15Q9H2J7 730 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 NIPAL2Q9H841 368 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 HRASLS2Q9NWW9 162 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 PCDHGB2Q9Y5G2 931 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 KLF2Q9Y5W3 355 aaPredicted RBP13.79□□□□□ -0.2
PBX3-201ENST00000342287 AUP1Q9Y679 476 aa13.79□□□□□ -0.2
PBX3-201ENST00000342287 ELOVL7A1L3X0 281 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 OR2A25A4D2G3 310 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 B4DGG1 531 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 CLIC1O00299 241 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 GSTA4O15217 222 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 MT-ND2P03891 347 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 LCKP06239 509 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 ZNF3P17036 446 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 GBX2P52951 348 aaPredicted RBP13.78□□□□□ -0.2
PBX3-201ENST00000342287 NXPH1P58417 271 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 TRA2BP62995 288 aaKnown RBP13.78□□□□□ -0.2
PBX3-201ENST00000342287 KCNAB2Q13303 367 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 DTWD1Q8N5C7 304 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 SRFBP1Q8NEF9 429 aaKnown RBP13.78□□□□□ -0.2
PBX3-201ENST00000342287 LMX1AQ8TE12 382 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 MS4A6EQ96DS6 147 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 RHNO1Q9BSD3 238 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 C1QTNF6Q9BXI9 259 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 KLHL31Q9H511 634 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 RNF167Q9H6Y7 350 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 ZNF639Q9UID6 485 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 MKL2Q9ULH7 1088 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 PEX16Q9Y5Y5 336 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 LYVE1Q9Y5Y7 322 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 A0A0B4J293 547 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 UGT2B17O75795 530 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 ANGPTL1O95841 491 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 ENGP17813 658 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 GGT1P19440 569 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 EFNA1P20827 205 aaPredicted RBP13.78□□□□□ -0.2
PBX3-201ENST00000342287 SSR2P43308 183 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 UGT2B15P54855 530 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 ZXDAP98168 799 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 SLC5A12Q1EHB4 618 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 ARMCX4Q5H9R4 360 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 CALHM3Q86XJ0 350 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 AVL9Q8NBF6 648 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms