RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 ZFP90Q8TF47 636 aa13.86□□□□□ -0.19
RET-201ENST00000340058 FOXN4Q96NZ1 517 aa13.86□□□□□ -0.19
RET-201ENST00000340058 COMMD4Q9H0A8 199 aa13.86□□□□□ -0.19
RET-201ENST00000340058 UBE2QL1A1L167 161 aa13.85□□□□□ -0.19
RET-201ENST00000340058 CD160O95971 181 aa13.85□□□□□ -0.19
RET-201ENST00000340058 ADAP00813 363 aa13.85□□□□□ -0.19
RET-201ENST00000340058 CD2P06729 351 aa13.85□□□□□ -0.19
RET-201ENST00000340058 HEXBP07686 556 aa13.85□□□□□ -0.19
RET-201ENST00000340058 NR0B1P51843 470 aaKnown RBP13.85□□□□□ -0.19
RET-201ENST00000340058 GPR18Q14330 331 aa13.85□□□□□ -0.19
RET-201ENST00000340058 GAS6Q14393 721 aa13.85□□□□□ -0.19
RET-201ENST00000340058 HYAL4Q2M3T9 481 aa13.85□□□□□ -0.19
RET-201ENST00000340058 MCATQ8IVS2 390 aaKnown RBP13.85□□□□□ -0.19
RET-201ENST00000340058 OR2L3Q8NG85 312 aa13.85□□□□□ -0.19
RET-201ENST00000340058 C8orf33Q9H7E9 229 aaPredicted RBP13.85□□□□□ -0.19
RET-201ENST00000340058 GRHPRQ9UBQ7 328 aa13.85□□□□□ -0.19
RET-201ENST00000340058 UNC119BA6NIH7 251 aa13.85□□□□□ -0.19
RET-201ENST00000340058 C9J4A7 227 aa13.85□□□□□ -0.19
RET-201ENST00000340058 HK1P19367 917 aa13.85□□□□□ -0.19
RET-201ENST00000340058 DCKP27707 260 aa13.85□□□□□ -0.19
RET-201ENST00000340058 CA5AP35218 305 aa13.85□□□□□ -0.19
RET-201ENST00000340058 WDR45BQ5MNZ6 344 aa13.85□□□□□ -0.19
RET-201ENST00000340058 RNF111Q6ZNA4 994 aa13.85□□□□□ -0.19
RET-201ENST00000340058 KRT77Q7Z794 578 aa13.85□□□□□ -0.19
RET-201ENST00000340058 ZMYND19Q96E35 227 aaPredicted RBP13.85□□□□□ -0.19
RET-201ENST00000340058 CCDC115Q96NT0 180 aa13.85□□□□□ -0.19
RET-201ENST00000340058 ADOQ96SZ5 270 aa13.85□□□□□ -0.19
RET-201ENST00000340058 SPNS1Q9H2V7 528 aa13.85□□□□□ -0.19
RET-201ENST00000340058 MTHFD2LQ9H903 347 aaPredicted RBP13.85□□□□□ -0.19
RET-201ENST00000340058 SLC6A13Q9NSD5 602 aa13.85□□□□□ -0.19
RET-201ENST00000340058 EVA1BQ9NVM1 165 aa13.85□□□□□ -0.19
RET-201ENST00000340058 UCKL1Q9NWZ5 548 aa13.85□□□□□ -0.19
RET-201ENST00000340058 OR51B4Q9Y5P0 310 aa13.85□□□□□ -0.19
RET-201ENST00000340058 PRAMEF26H0Y7S4 382 aa13.85□□□□□ -0.19
RET-201ENST00000340058 PPP1R3DO95685 299 aa13.85□□□□□ -0.19
RET-201ENST00000340058 SPARCP09486 303 aa13.85□□□□□ -0.19
RET-201ENST00000340058 ATP5A1P25705 553 aaKnown RBP13.85□□□□□ -0.19
RET-201ENST00000340058 PCSK6P29122 969 aa13.85□□□□□ -0.19
RET-201ENST00000340058 CSNK1G2P78368 415 aa13.85□□□□□ -0.19
RET-201ENST00000340058 NFATC4Q14934 902 aa13.85□□□□□ -0.19
RET-201ENST00000340058 SMU1Q2TAY7 513 aa13.85□□□□□ -0.19
RET-201ENST00000340058 LINC00471Q8N535 108 aa13.85□□□□□ -0.19
RET-201ENST00000340058 OR5T3Q8NGG3 340 aa13.85□□□□□ -0.19
RET-201ENST00000340058 ING3Q9NXR8 418 aa13.85□□□□□ -0.19
RET-201ENST00000340058 FTSJ1Q9UET6 329 aa13.85□□□□□ -0.19
RET-201ENST00000340058 CEPT1Q9Y6K0 416 aa13.85□□□□□ -0.19
RET-201ENST00000340058 UNC13CQ8NB66 2214 aa13.85□□□□□ -0.19
RET-201ENST00000340058 A0A1W2PRQ8 180 aa13.84□□□□□ -0.19
RET-201ENST00000340058 ARHGEF15O94989 841 aa13.84□□□□□ -0.19
RET-201ENST00000340058 ARFIP1P53367 373 aa13.84□□□□□ -0.19
RET-201ENST00000340058 ARHGAP19Q14CB8 494 aa13.84□□□□□ -0.19
RET-201ENST00000340058 PROX2Q3B8N5 592 aa13.84□□□□□ -0.19
RET-201ENST00000340058 CEACAM19Q7Z692 300 aa13.84□□□□□ -0.19
RET-201ENST00000340058 ACBD7Q8N6N7 88 aa13.84□□□□□ -0.19
RET-201ENST00000340058 OR8J2Q8NGG1 315 aa13.84□□□□□ -0.19
RET-201ENST00000340058 TNFAIP8L1Q8WVP5 186 aa13.84□□□□□ -0.19
RET-201ENST00000340058 NSMAFQ92636 917 aa13.84□□□□□ -0.19
RET-201ENST00000340058 OR4K3Q96R72 315 aa13.84□□□□□ -0.19
RET-201ENST00000340058 EGLN3Q9H6Z9 239 aa13.84□□□□□ -0.19
RET-201ENST00000340058 NANSQ9NR45 359 aa13.84□□□□□ -0.19
RET-201ENST00000340058 SEC14L4Q9UDX3 406 aa13.84□□□□□ -0.19
RET-201ENST00000340058 C17orf113A0A1B0GUU1 675 aa13.84□□□□□ -0.19
RET-201ENST00000340058 FAM221BA6H8Z2 402 aa13.84□□□□□ -0.19
RET-201ENST00000340058 GFYI3L273 518 aa13.84□□□□□ -0.19
RET-201ENST00000340058 PEPDP12955 493 aa13.84□□□□□ -0.19
RET-201ENST00000340058 SSTR4P31391 388 aa13.84□□□□□ -0.19
RET-201ENST00000340058 MAP3K8P41279 467 aa13.84□□□□□ -0.19
RET-201ENST00000340058 DCDC1P59894 354 aa13.84□□□□□ -0.19
RET-201ENST00000340058 CHAF1BQ13112 559 aa13.84□□□□□ -0.19
RET-201ENST00000340058 ZNF385BQ569K4 471 aa13.84□□□□□ -0.19
RET-201ENST00000340058 KIAA1211LQ6NV74 962 aa13.84□□□□□ -0.19
RET-201ENST00000340058 B3GNT8Q7Z7M8 397 aa13.84□□□□□ -0.19
RET-201ENST00000340058 SLC44A3Q8N4M1 653 aa13.84□□□□□ -0.19
RET-201ENST00000340058 OMA1Q96E52 524 aa13.84□□□□□ -0.19
RET-201ENST00000340058 OR7D2Q96RA2 312 aa13.84□□□□□ -0.19
RET-201ENST00000340058 NIPSNAP1Q9BPW8 284 aa13.84□□□□□ -0.19
RET-201ENST00000340058 MS4A8Q9BY19 250 aa13.84□□□□□ -0.19
RET-201ENST00000340058 GLIPR2Q9H4G4 154 aa13.84□□□□□ -0.19
RET-201ENST00000340058 SERGEFQ9UGK8 458 aa13.84□□□□□ -0.19
RET-201ENST00000340058 GASTP01350 101 aa13.84□□□□□ -0.19
RET-201ENST00000340058 BCL6P41182 706 aa13.84□□□□□ -0.19
RET-201ENST00000340058 PPP2CBP62714 309 aa13.84□□□□□ -0.19
RET-201ENST00000340058 PPP2CAP67775 309 aa13.84□□□□□ -0.19
RET-201ENST00000340058 SGCBQ16585 318 aa13.84□□□□□ -0.19
RET-201ENST00000340058 ZNF627Q7L945 461 aa13.84□□□□□ -0.19
RET-201ENST00000340058 AVL9Q8NBF6 648 aa13.84□□□□□ -0.19
RET-201ENST00000340058 MED28Q9H204 178 aa13.84□□□□□ -0.19
RET-201ENST00000340058 RMI1Q9H9A7 625 aa13.84□□□□□ -0.19
RET-201ENST00000340058 DHCR7Q9UBM7 475 aaKnown RBP13.84□□□□□ -0.19
RET-201ENST00000340058 A0A0G2JPF8 293 aa13.83□□□□□ -0.19
RET-201ENST00000340058 C12orf71A8MTZ7 269 aa13.83□□□□□ -0.19
RET-201ENST00000340058 HNRNPCL3B7ZW38 293 aa13.83□□□□□ -0.19
RET-201ENST00000340058 HOXC11O43248 304 aaPredicted RBP13.83□□□□□ -0.19
RET-201ENST00000340058 HNRNPCL4P0DMR1 293 aa13.83□□□□□ -0.19
RET-201ENST00000340058 CMPK2Q5EBM0 449 aa13.83□□□□□ -0.19
RET-201ENST00000340058 OR2G6Q5TZ20 316 aa13.83□□□□□ -0.19
RET-201ENST00000340058 CARD17Q5XLA6 110 aa13.83□□□□□ -0.19
RET-201ENST00000340058 LILRA6Q6PI73 481 aa13.83□□□□□ -0.19
RET-201ENST00000340058 UBQLNLQ8IYU4 475 aa13.83□□□□□ -0.19
RET-201ENST00000340058 SLC16A11Q8NCK7 471 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms