RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 TEX10Q9NXF1 929 aaPredicted RBP6.12□□□□□ -1.43
HMG20A-201ENST00000336216 CCDC59Q9P031 241 aaKnown RBP6.12□□□□□ -1.43
HMG20A-201ENST00000336216 APOBEC3BQ9UH17 382 aaKnown RBP6.12□□□□□ -1.43
HMG20A-201ENST00000336216 PSORS1C1Q9UIG5 152 aa6.12□□□□□ -1.43
HMG20A-201ENST00000336216 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 FAM183AA6NL82 134 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 DSCR3O14972 297 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 CACNG3O60359 315 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 ZNF821O75541 412 aaPredicted RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 NCR1O76036 304 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 VNN2O95498 520 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 NPPBP16860 134 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 C5AR1P21730 350 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 UQCRC2P22695 453 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 ZNF81P51508 661 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 ITGA1P56199 1179 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 PFN3P60673 137 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 CXCR4P61073 352 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 GPLD1P80108 840 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 PRKCDQ05655 676 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 CBLBQ13191 982 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 MAB21L1Q13394 359 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 KCNC3Q14003 757 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 TAF13Q15543 124 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 TBCEQ15813 527 aaPredicted RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 FAM209AQ5JX71 171 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 UBQLNLQ8IYU4 475 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 ACOT4Q8N9L9 421 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 ZNF248Q8NDW4 579 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 TTLQ8NG68 377 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 OR4K5Q8NGD3 323 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 OR6F1Q8NGZ6 308 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 ISG20Q96AZ6 181 aaKnown RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 ECHDC3Q96DC8 303 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 C16orf58Q96GQ5 468 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 SNX18Q96RF0 628 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 BCL7BQ9BQE9 202 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 P2RY12Q9H244 342 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 ALKBH4Q9NXW9 302 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 MRPL39Q9NYK5 338 aaKnown RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 SLC23A2Q9UGH3 650 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 ATXN7L1Q9ULK2 861 aaPredicted RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 YARS2Q9Y2Z4 477 aaKnown RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 AKAP6Q13023 2319 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 CDC14CA4D256 554 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 HMX3A6NHT5 357 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 SLC16A5O15375 505 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 STX11O75558 287 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 GPX5O75715 221 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 ALX3O95076 343 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 KCNK5O95279 499 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 ADH1BP00325 375 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 ENDOUP21128 410 aaKnown RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 ACSL1P33121 698 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 HSD17B2P37059 387 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 NAA10P41227 235 aaPredicted RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 MLLT3P42568 568 aaPredicted RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 EIF1AXP47813 144 aaKnown RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 TIAL1Q01085 375 aaKnown RBP eCLIP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 BNC1Q01954 994 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 HHEXQ03014 270 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 BCL2A1Q16548 175 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 NDUFA9Q16795 377 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 OR2G6Q5TZ20 316 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 DPPA4Q7L190 304 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 ASPGQ86U10 573 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 LACC1Q8IV20 430 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 FAM160A2Q8N612 972 aaPredicted RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 SYT14Q8NB59 555 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 BEST4Q8NFU0 473 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 CCL4L1Q8NHW4 92 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 C9orf43Q8TAL5 461 aaPredicted RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 AP3S1Q92572 193 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 RAB7BQ96AH8 199 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 APOOQ9BUR5 198 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 GSDMCQ9BYG8 508 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 MKRN2Q9H000 416 aaKnown RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 NDRG4Q9ULP0 352 aaKnown RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 PPT2Q9UMR5 302 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 SLC6A14Q9UN76 642 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 GRIP1Q9Y3R0 1128 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 HSPE1-MOB4S4R3N1 261 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 SCN3AQ9NY46 2000 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 LOC105369274A0A096LPK9 316 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 A0A0A6YYC8 382 aaPredicted RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 OR2W5A6NFC9 320 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 CD8B2A6NJW9 211 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 C11orf98E9PRG8 122 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 I3L1I5 382 aaPredicted RBP6.11□□□□□ -1.43
HMG20A-201ENST00000336216 ETHE1O95571 254 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 SEMA4FO95754 770 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 DHFRP00374 187 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 CTSLP07711 333 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 CD8BP10966 210 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 CD6P30203 668 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 MMP12P39900 470 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 OR3A3P47888 321 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 CRISP1P54107 249 aa6.11□□□□□ -1.43
HMG20A-201ENST00000336216 MESP2Q0VG99 397 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms