RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 ST3GAL3Q11203 375 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 MAP4K2Q12851 820 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 ZNF155Q12901 538 aaPredicted RBP13.04□□□□□ -0.32
TRAIP-201ENST00000331456 DUSP8Q13202 625 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 GRM7Q14831 915 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 EXOSC7Q15024 291 aaKnown RBP13.04□□□□□ -0.32
TRAIP-201ENST00000331456 TRAM2Q15035 370 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 GTF2IRD2BQ6EKJ0 949 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 GTF2IRD2Q86UP8 949 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 GALNT12Q8IXK2 581 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 ZNF619Q8N2I2 560 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 DEFB123Q8N688 67 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 OR4K5Q8NGD3 323 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 GPR151Q8TDV0 419 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 DOK4Q8TEW6 326 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 RORBQ92753 470 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 MYDGFQ969H8 173 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 RBM18Q96H35 190 aaKnown RBP13.04□□□□□ -0.32
TRAIP-201ENST00000331456 PEX11GQ96HA9 241 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 ZNF350Q9GZX5 532 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 ANKRD19PQ9H560 264 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 PRTFDC1Q9NRG1 225 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 ZNF226Q9NYT6 803 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 WARS2Q9UGM6 360 aaKnown RBP13.04□□□□□ -0.32
TRAIP-201ENST00000331456 PCDHGA10Q9Y5H3 936 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 A0A1B0GVT2 93 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 DUX1O43812 170 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 TPST2O60704 377 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 DBIP07108 87 aaKnown RBP13.03□□□□□ -0.32
TRAIP-201ENST00000331456 CT62P0C5K7 136 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 GSTM3P21266 225 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 EMP3P54852 163 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 POU6F2P78424 691 aaPredicted RBP13.03□□□□□ -0.32
TRAIP-201ENST00000331456 DMWDQ09019 674 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 DYNC1I2Q13409 638 aaKnown RBP13.03□□□□□ -0.32
TRAIP-201ENST00000331456 ZNHIT3Q15649 155 aaPredicted RBP13.03□□□□□ -0.32
TRAIP-201ENST00000331456 GPR68Q15743 365 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 NKAIN2Q5VXU1 208 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 CD300LDQ6UXZ3 194 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 PLEKHM3Q6ZWE6 761 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 MMABQ96EY8 250 aaPredicted RBP13.03□□□□□ -0.32
TRAIP-201ENST00000331456 RBCK1Q9BYM8 510 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 POLE3Q9NRF9 147 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 MAN2C1Q9NTJ4 1040 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 REV1Q9UBZ9 1251 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 KLHL3Q9UH77 587 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 FITM1A5D6W6 292 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 AGAP5A6NIR3 686 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 CPSF4LA6NMK7 179 aaKnown RBP13.03□□□□□ -0.32
TRAIP-201ENST00000331456 H3BMQ9 156 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 H3BN98 237 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 CYP7B1O75881 506 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 MED26O95402 600 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 MT-ND2P03891 347 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 PCSK6P29122 969 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 FNTBP49356 437 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 ARRB1P49407 418 aaPredicted RBP13.03□□□□□ -0.32
TRAIP-201ENST00000331456 OR1D5P58170 312 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 ALDH6A1Q02252 535 aaKnown RBP13.03□□□□□ -0.32
TRAIP-201ENST00000331456 PTCHD4Q6ZW05 846 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 AHSA2Q719I0 299 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 RRM2BQ7LG56 351 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 PLXDC1Q8IUK5 500 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 SHISA5Q8N114 240 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 OR52R1Q8NGF1 315 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 RAB2BQ8WUD1 216 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 FAR1Q8WVX9 515 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 RIT1Q92963 219 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 COG8Q96MW5 612 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 COPS4Q9BT78 406 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 SAP130Q9H0E3 1048 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 ARMC7Q9H6L4 198 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 CTPS2Q9NRF8 586 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 CLN6Q9NWW5 311 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 PSORS1C1Q9UIG5 152 aa13.03□□□□□ -0.32
TRAIP-201ENST00000331456 GPR55Q9Y2T6 319 aaPredicted RBP13.03□□□□□ -0.32
TRAIP-201ENST00000331456 EYSQ5T1H1 3165 aa13.02□□□□□ -0.32
TRAIP-201ENST00000331456 IGHV1OR21-1A0A087WYE8 117 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 CCDC163A0A0D9SF12 145 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 SH3D21A4FU49 640 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 CLCA1A8K7I4 914 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 H0YIG0 161 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 GNSP15586 552 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 GLB1P16278 677 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 GABRB1P18505 474 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 GABRA3P34903 492 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 CNR2P34972 360 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 GPR3P46089 330 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 IGLV3-21P80748 117 aaPredicted RBP13.02□□□□□ -0.33
TRAIP-201ENST00000331456 CCNJQ5T5M9 372 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 TMEM236Q5W0B7 351 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 C1orf94Q6P1W5 598 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 MAMSTRQ6ZN01 415 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 ZNF836Q6ZNA1 936 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 CCDC103Q8IW40 242 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 CLIP4Q8N3C7 705 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 MORN4Q8NDC4 146 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 PIK3R3Q92569 461 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 DGAT2Q96PD7 388 aa13.02□□□□□ -0.33
TRAIP-201ENST00000331456 MCHR1Q99705 422 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms