RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 ADH1CP00326 375 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 EPCAMP16422 314 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 GPX2P18283 190 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 PDHA2P29803 388 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 RBM34P42696 430 aaKnown RBP13.29□□□□□ -0.28
EPHB3-201ENST00000330394 POU6F2P78424 691 aaPredicted RBP13.29□□□□□ -0.28
EPHB3-201ENST00000330394 GAS6Q14393 721 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 TRIM46Q7Z4K8 759 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 LRRTM4Q86VH4 590 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 ATCAYQ86WG3 371 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 BEST3Q8N1M1 668 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 MFSD4AQ8N468 514 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 NSMAFQ92636 917 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 CHFRQ96EP1 664 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 SLC25A18Q9H1K4 315 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 SRMSQ9H3Y6 488 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 SRA1Q9HD15 236 aaKnown RBP13.29□□□□□ -0.28
EPHB3-201ENST00000330394 ATPIF1Q9UII2 106 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 B8ZZF3 427 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 GABRPO00591 440 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 SLC16A5O15375 505 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 LATO43561 262 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 CACNG3O60359 315 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 HTR1AP08908 422 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 CTSCP53634 463 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 ARFRP1Q13795 201 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 DUSP7Q16829 419 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 GPALPP1Q8IXQ4 340 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 HORMAD2Q8N7B1 307 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 SUN3Q8TAQ9 357 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 FATE1Q969F0 183 aa13.29□□□□□ -0.28
EPHB3-201ENST00000330394 ZMYND19Q96E35 227 aaPredicted RBP13.29□□□□□ -0.28
EPHB3-201ENST00000330394 TMEFF2Q9UIK5 374 aaPredicted RBP13.29□□□□□ -0.28
EPHB3-201ENST00000330394 COL2A1P02458 1487 aaPredicted RBP13.29□□□□□ -0.28
EPHB3-201ENST00000330394 B3GALT2O43825 422 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 JUNDP17535 347 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 S100A10P60903 97 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 COL28A1Q2UY09 1125 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 FAM76BQ5HYJ3 339 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 GATSQ8NAP1 163 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 PMM1Q92871 262 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 METTL8Q9H825 291 aaKnown RBP13.28□□□□□ -0.28
EPHB3-201ENST00000330394 COPS3Q9UNS2 423 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 TNRC6CQ9HCJ0 1690 aaKnown RBP13.28□□□□□ -0.28
EPHB3-201ENST00000330394 RLN2P04090 185 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 CTNNB1P35222 781 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 OR3A2P47893 321 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 SP3Q02447 781 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 CDC20Q12834 499 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 OR52E2Q8NGJ4 325 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 OR6N2Q8NGY6 317 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 ASB11Q8WXH4 323 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 TRIB2Q92519 343 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 KCNN1Q92952 543 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 PDLIM5Q96HC4 596 aaKnown RBP13.28□□□□□ -0.28
EPHB3-201ENST00000330394 CST11Q9H112 138 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 PCDHB16Q9NRJ7 776 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 A3GALT2U3KPV4 340 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 DOCK2Q92608 1830 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 FARS2O95363 451 aaKnown RBP13.28□□□□□ -0.28
EPHB3-201ENST00000330394 HMGN2P05204 90 aaKnown RBP13.28□□□□□ -0.28
EPHB3-201ENST00000330394 ASGR2P07307 311 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 CTSOP43234 321 aaPredicted RBP13.28□□□□□ -0.28
EPHB3-201ENST00000330394 GAB1Q13480 694 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 ACSM3Q53FZ2 586 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 SLC22A10Q63ZE4 541 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 LYPD4Q6UWN0 246 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 TMEM17Q86X19 198 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 HDDC3Q8N4P3 179 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 OR2L3Q8NG85 312 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 TM9SF4Q92544 642 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 CDCP1Q9H5V8 836 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 HCSTQ9UBK5 93 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 ZNF225Q9UK10 706 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 RCE1Q9Y256 329 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 TMEM5Q9Y2B1 443 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 UNC119BA6NIH7 251 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 ATP6V1G2-DDX39BF2Z307 99 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 PRKCAP17252 672 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 SHC1P29353 583 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 SLC6A6P31641 620 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 ACTR1BP42025 376 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 ARHGDIBP52566 201 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 ACTR1AP61163 376 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 PSPHP78330 225 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 IFITM3Q01628 133 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 PIP5KL1Q5T9C9 394 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 QSOX2Q6ZRP7 698 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 RBM45Q8IUH3 476 aaKnown RBP13.28□□□□□ -0.28
EPHB3-201ENST00000330394 VRK3Q8IV63 474 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 IQCF2Q8IXL9 164 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 ZDHHC1Q8WTX9 485 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 SGTBQ96EQ0 304 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 ZNF350Q9GZX5 532 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 PPA2Q9H2U2 334 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 MED20Q9H944 212 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 TLR9Q9NR96 1032 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 POLE3Q9NRF9 147 aa13.28□□□□□ -0.28
EPHB3-201ENST00000330394 MYEF2Q9P2K5 600 aaKnown RBP13.28□□□□□ -0.28
EPHB3-201ENST00000330394 KIAA0100Q14667 2235 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms