RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 PRPS2P11908 318 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 PTGDSP41222 190 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 FRKP42685 505 aaPredicted RBP25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 SLC18A1P54219 525 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 TOMM20Q15388 145 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 AGBL2Q5U5Z8 902 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 ACAD11Q709F0 780 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 KIRREL3Q8IZU9 778 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 OR4N2Q8NGD1 307 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 RND1Q92730 232 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 TUBGCP3Q96CW5 907 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 Q9N2J8 555 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 ATP6V1HQ9UI12 483 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 RAP2CQ9Y3L5 183 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 PCDHGB3Q9Y5G1 929 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 SNPHO15079 494 aa25.23■■□□□ 1.63
ATPAF1-201ENST00000329231 HOXD4P09016 255 aaPredicted RBP25.23■■□□□ 1.63
ATPAF1-201ENST00000329231 PTPN6P29350 595 aa25.23■■□□□ 1.63
ATPAF1-201ENST00000329231 HHATQ5VTY9 493 aa25.23■■□□□ 1.63
ATPAF1-201ENST00000329231 IL23RQ5VWK5 629 aa25.23■■□□□ 1.63
ATPAF1-201ENST00000329231 ZNF781Q8N8C0 355 aa25.23■■□□□ 1.63
ATPAF1-201ENST00000329231 ANKRD42Q8N9B4 389 aa25.23■■□□□ 1.63
ATPAF1-201ENST00000329231 CA5BP1Q8WTZ4 195 aa25.23■■□□□ 1.63
ATPAF1-201ENST00000329231 C1orf50Q9BV19 199 aa25.23■■□□□ 1.63
ATPAF1-201ENST00000329231 C15orf38-AP3S2A0A0A6YYH1 394 aa25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 SCAMP2O15127 329 aaKnown RBP25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 HNRNPRO43390 633 aaKnown RBP25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 GABRA1P14867 456 aa25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 GRNP28799 593 aaKnown RBP25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 SLC1A6P48664 564 aa25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 PMPCAQ10713 525 aa25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 MAD2L1Q13257 205 aaPredicted RBP25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 B3GNT6Q6ZMB0 384 aa25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 RPRMLQ8N4K4 120 aa25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 CEP70Q8NHQ1 597 aa25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 ASB5Q8WWX0 329 aa25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 EFHD2Q96C19 240 aaPredicted RBP25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 PAIP2Q9BPZ3 127 aaKnown RBP25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 LMF2Q9BU23 707 aaKnown RBP25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 ZNF395Q9H8N7 513 aaPredicted RBP25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 VIPAS39Q9H9C1 493 aa25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 ALKBH4Q9NXW9 302 aa25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 MRTO4Q9UKD2 239 aaKnown RBP25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 CBLCQ9ULV8 474 aa25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 EIF3LQ9Y262 564 aaKnown RBP25.22■■□□□ 1.63
ATPAF1-201ENST00000329231 C2orf72A6NCS6 295 aa25.21■■□□□ 1.63
ATPAF1-201ENST00000329231 BGNP21810 368 aa25.21■■□□□ 1.63
ATPAF1-201ENST00000329231 RPL14P50914 215 aaKnown RBP25.21■■□□□ 1.63
ATPAF1-201ENST00000329231 STX3Q13277 289 aa25.21■■□□□ 1.63
ATPAF1-201ENST00000329231 GAB1Q13480 694 aa25.21■■□□□ 1.63
ATPAF1-201ENST00000329231 CDSNQ15517 529 aa25.21■■□□□ 1.63
ATPAF1-201ENST00000329231 DECR1Q16698 335 aa25.21■■□□□ 1.63
ATPAF1-201ENST00000329231 DTNBP1Q96EV8 351 aa25.21■■□□□ 1.63
ATPAF1-201ENST00000329231 C3orf14Q9HBI5 128 aa25.21■■□□□ 1.63
ATPAF1-201ENST00000329231 MAPRE3Q9UPY8 281 aa25.21■■□□□ 1.63
ATPAF1-201ENST00000329231 NCKAP5O14513 1909 aa25.21■■□□□ 1.63
ATPAF1-201ENST00000329231 UNC79Q9P2D8 2635 aa25.2■■□□□ 1.63
ATPAF1-201ENST00000329231 CBR3O75828 277 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 PTGER4P35408 488 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 NUP107P57740 925 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 PTGR1Q14914 329 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 MLC1Q15049 377 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 PDCD2Q16342 344 aaPredicted RBP25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 SMU1Q2TAY7 513 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 C1orf185Q5T7R7 199 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 WDR53Q7Z5U6 358 aaPredicted RBP25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 WDSUB1Q8N9V3 476 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 OR7A2PQ8NGA2 310 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 ARL8AQ96BM9 186 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 PRPF18Q99633 342 aaKnown RBP25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 TTYH2Q9BSA4 534 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 C20orf27Q9GZN8 174 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 EQTNQ9NQ60 294 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 ATAD3AQ9NVI7 634 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 NKIRAS1Q9NYS0 192 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 NTMQ9P121 344 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 FAM215AQ9Y5M1 114 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 WIF1Q9Y5W5 379 aa25.2■■□□□ 1.62
ATPAF1-201ENST00000329231 NAV2Q8IVL1 2488 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 CYP4B1P13584 511 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 PRPS1L1P21108 318 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 CHRNB4P30926 498 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 PSMD4P55036 377 aaKnown RBP25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 WDR4P57081 412 aaKnown RBP25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 EMX2Q04743 252 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 VPS26BQ4G0F5 336 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 CPTPQ5TA50 214 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 RTL6Q6ICC9 239 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 SZRD1Q7Z422 152 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 PLCZ1Q86YW0 608 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 NATD1Q8N6N6 113 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 FAM83FQ8NEG4 500 aaPredicted RBP25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 NUP43Q8NFH3 380 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 RNF138Q8WVD3 245 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 SORT1Q99523 831 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 RUBCNLQ9H714 662 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 SERHLQ9NQF3 203 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 NOP53Q9NZM5 478 aaKnown RBP25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 RNF6Q9Y252 685 aa25.19■■□□□ 1.62
ATPAF1-201ENST00000329231 EMC8O43402 210 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms