RNA–Protein interactions for RNA: ENST00000328333.12

COL7A1-201, Transcript of collagen type VII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL7A1, Length 9,276 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-201ENST00000328333 PRAMEF18Q5VWM3 479 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 OR4M1Q8NGD0 313 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 NAA11Q9BSU3 229 aaPredicted RBP13.6□□□□□ -0.23
COL7A1-201ENST00000328333 MAN2C1Q9NTJ4 1040 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 MPDZO75970 2070 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 CDK4P11802 303 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 NKX2-5P52952 324 aaPredicted RBP13.6□□□□□ -0.23
COL7A1-201ENST00000328333 BTN1A1Q13410 526 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 GPR176Q14439 515 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 RCBTB1Q8NDN9 531 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 LPPQ93052 612 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 ZNF597Q96LX8 424 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 ALDOAP04075 364 aaKnown RBP13.6□□□□□ -0.23
COL7A1-201ENST00000328333 PNMTP11086 282 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 C6P13671 934 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 CX3CR1P49238 355 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 NBPF12Q5TAG4 269 aaPredicted RBP13.6□□□□□ -0.23
COL7A1-201ENST00000328333 PRSS55Q6UWB4 352 aaPredicted RBP13.6□□□□□ -0.23
COL7A1-201ENST00000328333 P4HA3Q7Z4N8 544 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 ZNF546Q86UE3 836 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 KIAA1143Q96AT1 154 aaPredicted RBP13.6□□□□□ -0.23
COL7A1-201ENST00000328333 LRIG1Q96JA1 1093 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 WIF1Q9Y5W5 379 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 MAGEB1P43366 347 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 BDKRB1P46663 353 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 UPP1Q16831 310 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 ODF4Q2M2E3 257 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 SOHLH1Q5JUK2 328 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 OR11A1Q9GZK7 315 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 SCML2Q9UQR0 700 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 SMLR1H3BR10 107 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 RFXAPO00287 272 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 ACTL6BO94805 426 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 AHSGP02765 367 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 OSMP13725 252 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 CHRNA4P43681 627 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 GPR50Q13585 617 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 IGFN1Q86VF2 1251 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 TLE6Q9H808 572 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 SIAEQ9HAT2 523 aa13.6□□□□□ -0.23
COL7A1-201ENST00000328333 PRSS44E7EML9 344 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 GABRA5P31644 462 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 PLA2G7Q13093 441 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.59□□□□□ -0.23
COL7A1-201ENST00000328333 CPA4Q9UI42 421 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 CLN5O75503 358 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 CLIC3O95833 236 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 CD52P31358 61 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 CLCNKBP51801 687 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 CAP1Q01518 475 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 MFGE8Q08431 387 aaPredicted RBP13.59□□□□□ -0.23
COL7A1-201ENST00000328333 SIAH1Q8IUQ4 282 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 OR1E3Q8WZA6 343 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 L3HYPDHQ96EM0 354 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 FBXL4Q9UKA2 621 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 PXDNQ92626 1479 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 NEMP2A6NFY4 417 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 VIPR1P32241 457 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 PET117Q6UWS5 81 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 CXCL17Q6UXB2 119 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 FAM122BQ7Z309 247 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 B3GNT7Q8NFL0 401 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 SEC22CQ9BRL7 303 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 SOX1O00570 391 aaPredicted RBP13.59□□□□□ -0.23
COL7A1-201ENST00000328333 CLEC3AO75596 197 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 AQP2P41181 271 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 TANGO2Q6ICL3 276 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 TREML1Q86YW5 311 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 CHAC2Q8WUX2 184 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 SH3YL1Q96HL8 342 aaPredicted RBP13.59□□□□□ -0.23
COL7A1-201ENST00000328333 CXorf49A8MYA2 514 aaPredicted RBP13.59□□□□□ -0.23
COL7A1-201ENST00000328333 ENPP3O14638 875 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 APBB3O95704 486 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 PROS1P07225 676 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 CLDN8P56748 225 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 NIPAL4Q0D2K0 466 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 FUT10Q6P4F1 479 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 RETREG3Q86VR2 466 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 PLPP5Q8NEB5 264 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 CPT1CQ8TCG5 803 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 RNF141Q8WVD5 230 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 DAZAP1Q96EP5 407 aaKnown RBP13.59□□□□□ -0.23
COL7A1-201ENST00000328333 HIPK2Q9H2X6 1198 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 DMAC2Q9NW81 257 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 ZNF142P52746 1687 aaPredicted RBP13.59□□□□□ -0.23
COL7A1-201ENST00000328333 SRPX2O60687 465 aaPredicted RBP13.59□□□□□ -0.23
COL7A1-201ENST00000328333 IL33O95760 270 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 GBX1Q14549 363 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 PPA1Q15181 289 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 MICAQ29983 383 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 USP50Q70EL3 339 aaPredicted RBP13.59□□□□□ -0.23
COL7A1-201ENST00000328333 CERS5Q8N5B7 392 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 OR1S1Q8NH92 325 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 TFAP2BQ92481 460 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 TRIOBPQ9H2D6 2365 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 SHMT2P34897 504 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 CDKN1CP49918 316 aaPredicted RBP13.59□□□□□ -0.23
COL7A1-201ENST00000328333 FLI1Q01543 452 aaPredicted RBP13.59□□□□□ -0.23
COL7A1-201ENST00000328333 OR52E8Q6IFG1 317 aa13.59□□□□□ -0.23
COL7A1-201ENST00000328333 GPR148Q8TDV2 347 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms