RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 PTGS2P35354 604 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 HK3P52790 923 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 FOXK1P85037 733 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 DCST2Q5T1A1 773 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 SLCO4C1Q6ZQN7 724 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 ZNF627Q7L945 461 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 CCDC54Q8NEL0 328 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 OR7G1Q8NGA0 311 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 SEMA6CQ9H3T2 930 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 ACOT13Q9NPJ3 140 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 WDR37Q9Y2I8 494 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 TLCD2A6NGC4 264 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 CLPXO76031 633 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 HCKP08631 526 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 UGT2B7P16662 529 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 PRSS48Q7RTY5 328 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 TMEM173Q86WV6 379 aaPredicted RBP10.78□□□□□ -0.68
COL4A5-201ENST00000328300 SNIP1Q8TAD8 396 aaKnown RBP10.78□□□□□ -0.68
COL4A5-201ENST00000328300 ELP5Q8TE02 316 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 PRAMEF33A0A0G2JMD5 474 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 PRAMEF10O60809 474 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 RDH16O75452 317 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 RBMXL2O75526 392 aaKnown RBP10.78□□□□□ -0.68
COL4A5-201ENST00000328300 CH25HO95992 272 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 SRFP11831 508 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 IMPA1P29218 277 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 HOXC8P31273 242 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 XCR1P46094 333 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 MBTPS1Q14703 1052 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 ULK3Q6PHR2 472 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 CBLL1Q75N03 491 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 BPHLQ86WA6 291 aaPredicted RBP10.78□□□□□ -0.68
COL4A5-201ENST00000328300 ASB12Q8WXK4 309 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 SLC22A12Q96S37 553 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 UBE2ZQ9H832 354 aaPredicted RBP10.78□□□□□ -0.68
COL4A5-201ENST00000328300 AMBNQ9NP70 447 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 MAGED1Q9Y5V3 778 aaPredicted RBP10.78□□□□□ -0.68
COL4A5-201ENST00000328300 TARM1B6A8C7 271 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 NUDT6P53370 316 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 WSCD2Q2TBF2 565 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 FAM69BQ5VUD6 431 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 ZNF100Q8IYN0 542 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 RNF113BQ8IZP6 322 aaKnown RBP10.78□□□□□ -0.68
COL4A5-201ENST00000328300 NAGSQ8N159 534 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 JAGN1Q8N5M9 183 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 OR51G2Q8NGK0 314 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 TBC1D20Q96BZ9 403 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 CXCL16Q9H2A7 254 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 MEGF11A6BM72 1044 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 VILLO15195 856 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 RPP14O95059 124 aaKnown RBP10.78□□□□□ -0.68
COL4A5-201ENST00000328300 SLC9A3P48764 834 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 PHC1P78364 1004 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 SLC3A1Q07837 685 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 HSD17B12Q53GQ0 312 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 DHDHQ9UQ10 334 aa10.78□□□□□ -0.68
COL4A5-201ENST00000328300 LRRN3E7EW58 273 aa10.77□□□□□ -0.68
COL4A5-201ENST00000328300 SDC3O75056 442 aa10.77□□□□□ -0.68
COL4A5-201ENST00000328300 RGS9O75916 674 aaPredicted RBP10.77□□□□□ -0.68
COL4A5-201ENST00000328300 IFNA21P01568 189 aa10.77□□□□□ -0.68
COL4A5-201ENST00000328300 MC3RP41968 323 aa10.77□□□□□ -0.68
COL4A5-201ENST00000328300 SGSHP51688 502 aa10.77□□□□□ -0.68
COL4A5-201ENST00000328300 CMIPQ8IY22 773 aa10.77□□□□□ -0.68
COL4A5-201ENST00000328300 DPH2Q9BQC3 489 aaPredicted RBP10.77□□□□□ -0.68
COL4A5-201ENST00000328300 SLC30A2Q9BRI3 323 aa10.77□□□□□ -0.68
COL4A5-201ENST00000328300 LRRN3Q9H3W5 708 aa10.77□□□□□ -0.68
COL4A5-201ENST00000328300 MEPEQ9NQ76 525 aaPredicted RBP10.77□□□□□ -0.68
COL4A5-201ENST00000328300 EIF3KQ9UBQ5 218 aaKnown RBP10.77□□□□□ -0.68
COL4A5-201ENST00000328300 TBC1D24Q9ULP9 559 aa10.77□□□□□ -0.68
COL4A5-201ENST00000328300 CBLCQ9ULV8 474 aa10.77□□□□□ -0.68
COL4A5-201ENST00000328300 SPEF1Q9Y4P9 236 aa10.77□□□□□ -0.68
COL4A5-201ENST00000328300 PCDHGA3Q9Y5H0 932 aa10.77□□□□□ -0.68
COL4A5-201ENST00000328300 GABRR3A8MPY1 467 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 GALR3O60755 368 aaPredicted RBP10.77□□□□□ -0.69
COL4A5-201ENST00000328300 CDRT1O95170 752 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 SPARCP09486 303 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 ITGAMP11215 1152 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 HSD11B2P80365 405 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 MAD2L1BPQ15013 274 aaPredicted RBP10.77□□□□□ -0.69
COL4A5-201ENST00000328300 PROX2Q3B8N5 592 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 OR9A2Q8NGT5 310 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 CREB3L4Q8TEY5 395 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 URM1Q9BTM9 101 aaKnown RBP10.77□□□□□ -0.69
COL4A5-201ENST00000328300 ANKRD60Q9BZ19 345 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 OR14I1A6ND48 311 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 FOXD2O60548 495 aaPredicted RBP10.77□□□□□ -0.69
COL4A5-201ENST00000328300 SNAP29O95721 258 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 ZNF28P17035 718 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 PDHA2P29803 388 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 C1orf189Q5VU69 101 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 FAM205BPQ63HN1 556 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 ALKBH2Q6NS38 261 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 HSPBAP1Q96EW2 488 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 TMED9Q9BVK6 235 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 B3GNT4Q9C0J1 378 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 ARAFP10398 606 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 ZNF182P17025 639 aaPredicted RBP10.77□□□□□ -0.69
COL4A5-201ENST00000328300 RRADP55042 308 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 FOXA1P55317 472 aa10.77□□□□□ -0.69
COL4A5-201ENST00000328300 MADCAM1Q13477 382 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms