RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 RNASE12Q5GAN4 147 aaKnown RBP12.02□□□□□ -0.49
CCDC60-201ENST00000327554 SMARCD3Q6STE5 483 aa12.02□□□□□ -0.49
CCDC60-201ENST00000327554 CRTC1Q6UUV9 634 aa12.02□□□□□ -0.49
CCDC60-201ENST00000327554 RAB8BQ92930 207 aa12.02□□□□□ -0.49
CCDC60-201ENST00000327554 FOXJ1Q92949 421 aa12.02□□□□□ -0.49
CCDC60-201ENST00000327554 ADAM2Q99965 735 aa12.02□□□□□ -0.49
CCDC60-201ENST00000327554 SLC6A16Q9GZN6 736 aa12.02□□□□□ -0.49
CCDC60-201ENST00000327554 CD93Q9NPY3 652 aa12.02□□□□□ -0.49
CCDC60-201ENST00000327554 GKN1Q9NS71 199 aa12.02□□□□□ -0.49
CCDC60-201ENST00000327554 GMEB2Q9UKD1 530 aa12.02□□□□□ -0.49
CCDC60-201ENST00000327554 COPS3Q9UNS2 423 aa12.02□□□□□ -0.49
CCDC60-201ENST00000327554 OR51B4Q9Y5P0 310 aa12.02□□□□□ -0.49
CCDC60-201ENST00000327554 PLSCR5A0PG75 271 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 GSAPA4D1B5 854 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 RNF13O43567 381 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 FZD7O75084 574 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 RAB3AP20336 220 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 F8A1P23610 371 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 SHC1P29353 583 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 RPL3P39023 403 aaKnown RBP12.01□□□□□ -0.49
CCDC60-201ENST00000327554 CDH11P55287 796 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 OR10A3P58181 314 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 SHC2P98077 582 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 DUSP4Q13115 394 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 GRIN2CQ14957 1233 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 GPR68Q15743 365 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 HECTD3Q5T447 861 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 SLC27A4Q6P1M0 643 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 IKBIPQ70UQ0 350 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 OR56B4Q8NH76 319 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 MOSPD2Q8NHP6 518 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 NEURL3Q96EH8 262 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 PELOQ9BRX2 385 aaKnown RBP12.01□□□□□ -0.49
CCDC60-201ENST00000327554 BTBD1Q9H0C5 482 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 SERHL2Q9H4I8 314 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 BRD9Q9H8M2 597 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 PCDHB16Q9NRJ7 776 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 ADARB2Q9NS39 739 aaKnown RBP12.01□□□□□ -0.49
CCDC60-201ENST00000327554 OR6C2Q9NZP2 312 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 TAAR2Q9P1P5 351 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 PTGFRNQ9P2B2 879 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 CPNE7Q9UBL6 633 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 SLC9A8Q9Y2E8 581 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 PRELID3BQ9Y3B1 194 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 SIRT4Q9Y6E7 314 aaPredicted RBP12.01□□□□□ -0.49
CCDC60-201ENST00000327554 CENPFP49454 3210 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 NUP210Q8TEM1 1887 aaPredicted RBP12.01□□□□□ -0.49
CCDC60-201ENST00000327554 A0A0G2JK05 382 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 TCRBV16S1A1N1A0A5B0 115 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 ANHXE9PGG2 379 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 MT-ND4P03905 459 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 ALDOBP05062 364 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 ADGRF1Q5T601 910 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 GDF6Q6KF10 455 aaPredicted RBP12.01□□□□□ -0.49
CCDC60-201ENST00000327554 MED27Q6P2C8 311 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 SFXN4Q6P4A7 337 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 ZNF322Q6U7Q0 402 aaPredicted RBP12.01□□□□□ -0.49
CCDC60-201ENST00000327554 ATRAIDQ6UW56 229 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 FAM198BQ6UWH4 519 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 SLCO4C1Q6ZQN7 724 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 RASSF6Q6ZTQ3 369 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 RRM2BQ7LG56 351 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 UBE2Q1Q7Z7E8 422 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 KLHDC8AQ8IYD2 350 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 RPLP0P6Q8NHW5 317 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 TEX47Q8TBZ9 253 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 FNDC11Q9BVV2 318 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 SPRTNQ9H040 489 aaPredicted RBP12.01□□□□□ -0.49
CCDC60-201ENST00000327554 SLC6A15Q9H2J7 730 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 SCPEP1Q9HB40 452 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 MARK1Q9P0L2 795 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 SPATA2Q9UM82 520 aa12.01□□□□□ -0.49
CCDC60-201ENST00000327554 EXOGQ9Y2C4 368 aaKnown RBP12.01□□□□□ -0.49
CCDC60-201ENST00000327554 PRG3Q9Y2Y8 225 aaPredicted RBP12.01□□□□□ -0.49
CCDC60-201ENST00000327554 OR6C65A6NJZ3 312 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 PTP4A3O75365 173 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 WNT1P04628 370 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 IL3P08700 152 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 ACP5P13686 325 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 DRD5P21918 477 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 MAPK9P45984 424 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 ERVK-21P61565 698 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 ZNF169Q14929 603 aaPredicted RBP12□□□□□ -0.49
CCDC60-201ENST00000327554 AADACL4Q5VUY2 407 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 RETSATQ6NUM9 610 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 ZNF783Q6ZMS7 281 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 Q6ZTK2 550 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 BVESQ8NE79 360 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 OR51Q1Q8NH59 317 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 TRMT10AQ8TBZ6 339 aaKnown RBP12□□□□□ -0.49
CCDC60-201ENST00000327554 NEIL2Q969S2 332 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 ELMOD3Q96FG2 381 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 NPAS1Q99742 590 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 OR51B5Q9H339 312 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 ISG20L2Q9H9L3 353 aaKnown RBP12□□□□□ -0.49
CCDC60-201ENST00000327554 RPS6KB2Q9UBS0 482 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 SEC14L3Q9UDX4 400 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12□□□□□ -0.49
CCDC60-201ENST00000327554 SLC9B1P1A6NJY1 282 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 ZNF98A6NK75 572 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms