RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 APLFQ8IW19 511 aaPredicted RBP17.46■□□□□ 0.39
EXOSC3-201ENST00000327304 ESX1Q8N693 406 aa17.46■□□□□ 0.39
EXOSC3-201ENST00000327304 OR7G2Q8NG99 324 aa17.46■□□□□ 0.39
EXOSC3-201ENST00000327304 RASSF5Q8WWW0 418 aa17.46■□□□□ 0.39
EXOSC3-201ENST00000327304 GEMIN6Q8WXD5 167 aaKnown RBP17.46■□□□□ 0.39
EXOSC3-201ENST00000327304 RAB8BQ92930 207 aa17.46■□□□□ 0.39
EXOSC3-201ENST00000327304 MAGED4Q96JG8 741 aa17.46■□□□□ 0.39
EXOSC3-201ENST00000327304 DCHS1Q96JQ0 3298 aa17.46■□□□□ 0.39
EXOSC3-201ENST00000327304 MESP1Q9BRJ9 268 aa17.46■□□□□ 0.39
EXOSC3-201ENST00000327304 SPTBN4Q9H254 2564 aa17.46■□□□□ 0.39
EXOSC3-201ENST00000327304 REEP1Q9H902 201 aa17.46■□□□□ 0.39
EXOSC3-201ENST00000327304 VNN3Q9NY84 501 aa17.46■□□□□ 0.39
EXOSC3-201ENST00000327304 MAT2BQ9NZL9 334 aa17.46■□□□□ 0.39
EXOSC3-201ENST00000327304 C3orf18Q9UK00 162 aa17.46■□□□□ 0.39
EXOSC3-201ENST00000327304 PLOD2O00469 737 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 ASNA1O43681 348 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 KLF7O75840 302 aaPredicted RBP17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 HMGN2P05204 90 aaKnown RBP17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 OR12D1P0DN82 309 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 EMP2P54851 167 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 FOXC1Q12948 553 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 PRICKLE4Q2TBC4 344 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 USP51Q70EK9 711 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 NLGN4XQ8N0W4 816 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 LGI4Q8N135 537 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 SIMC1Q8NDZ2 872 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 NLGN4YQ8NFZ3 816 aaPredicted RBP17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 CYGBQ8WWM9 190 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 RBM18Q96H35 190 aaKnown RBP17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 ZNF607Q96SK3 696 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 EPYCQ99645 322 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 CRB3Q9BUF7 120 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 CXorf21Q9HAI6 301 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 PNO1Q9NRX1 252 aaKnown RBP17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 NXT1Q9UKK6 140 aaKnown RBP17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 U3KQV3 271 aa17.45■□□□□ 0.38
EXOSC3-201ENST00000327304 RAD1O60671 282 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 SLITRK5O94991 958 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 IFI6P09912 130 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 PRKAG1P54619 331 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 TRMT12Q53H54 448 aaKnown RBP17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 IGF2-ASQ6U949 168 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 HS3ST5Q8IZT8 346 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 NUP43Q8NFH3 380 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 ZNF675Q8TD23 568 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 FAM122AQ96E09 287 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 NRSN2Q9GZP1 204 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 SMURF2Q9HAU4 748 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 BCL2L10Q9HD36 194 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 NDUFAF4Q9P032 175 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 KLK13Q9UKR3 277 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 PTRH2Q9Y3E5 179 aaKnown RBP17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 SAMHD1Q9Y3Z3 626 aaKnown RBP17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 PCDHGB3Q9Y5G1 929 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 A8MUA0 341 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 STMND1H3BQB6 276 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 ADAMDEC1O15204 470 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 SLC28A2O43868 658 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 ALOX12BO75342 701 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 MFN2O95140 757 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 UMODP07911 640 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 TCN2P20062 427 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 LASP1Q14847 261 aaKnown RBP17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 FHL5Q5TD97 284 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 PRAMEF8Q5VWM4 474 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 PRAMEF7Q5VXH5 474 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 TTC23Q5W5X9 447 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 TSEN54Q7Z6J9 526 aaKnown RBP17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 GALNT12Q8IXK2 581 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 OR5D16Q8NGK9 328 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 XAGE5Q8WWM1 108 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 RIT1Q92963 219 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 ZNF300Q96RE9 604 aaPredicted RBP17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 RUBCNLQ9H714 662 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 PTGFRNQ9P2B2 879 aa17.44■□□□□ 0.38
EXOSC3-201ENST00000327304 DPPA5A6NC42 116 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 HRKO00198 91 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 BRINP1O60477 761 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 NME6O75414 186 aaPredicted RBP17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 SERPINB7O75635 380 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 DIRAS1O95057 198 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 GNAO1P09471 354 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 NR2F1P10589 423 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 STAT5AP42229 794 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 CRISP3P54108 245 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 RAD23AP54725 363 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 KCNC4Q03721 635 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 PPP1R8Q12972 351 aaKnown RBP17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 BIKQ13323 160 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 ANKRD37Q7Z713 158 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 SLC44A2Q8IWA5 706 aaPredicted RBP17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 BBS10Q8TAM1 723 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 PTPMT1Q8WUK0 201 aaPredicted RBP17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 CTHRC1Q96CG8 243 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 PELOQ9BRX2 385 aaKnown RBP17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 ORC6Q9Y5N6 252 aa17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 GPC6Q9Y625 555 aaPredicted RBP17.43■□□□□ 0.38
EXOSC3-201ENST00000327304 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 PRAMEF27A3QJZ7 478 aa17.42■□□□□ 0.38
EXOSC3-201ENST00000327304 HS6ST1O60243 411 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms