RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CMKLR1Q99788 373 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 TGIF2Q9GZN2 237 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 PIF1Q9H611 641 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 TMEM38AQ9H6F2 299 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 APMAPQ9HDC9 416 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 MKKSQ9NPJ1 570 aaPredicted RBP11.92□□□□□ -0.5
DDX39A-202ENST00000324340 SLC22A11Q9NSA0 550 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ZCCHC3Q9NUD5 404 aaKnown RBP11.92□□□□□ -0.5
DDX39A-202ENST00000324340 PAK1IP1Q9NWT1 392 aaPredicted RBP11.92□□□□□ -0.5
DDX39A-202ENST00000324340 PTGFRNQ9P2B2 879 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 VPS13AQ96RL7 3174 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 NUP214P35658 2090 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-202ENST00000324340 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 IGKV3D-11A0A0A0MRZ8 115 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 UPK1AO00322 258 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 POLR1CO15160 346 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-202ENST00000324340 PLOD3O60568 738 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 ALX3O95076 343 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 PTTG1O95997 202 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 SPTBP11277 2137 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 CCL4P13236 92 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 MC3RP41968 323 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 PPP5CP53041 499 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 BTG2P78543 158 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 PRR5P85299 388 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 IFITM2Q01629 132 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 ID2Q02363 134 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 RBBP4Q09028 425 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 MGAT2Q10469 447 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 SLC13A2Q13183 592 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 SERTAD2Q14140 314 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 ERV3-1Q14264 604 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 LTB4RQ15722 352 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 CYP51A1Q16850 503 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 PRICKLE4Q2TBC4 344 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 SPDYE7PQ495Y7 208 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 ARHGAP40Q5TG30 622 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 C1orf189Q5VU69 101 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 TTC23Q5W5X9 447 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 GLYATQ6IB77 296 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 VASH1Q7L8A9 365 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-202ENST00000324340 SIMC1Q8NDZ2 872 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 OR7G2Q8NG99 324 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 OR6Q1Q8NGQ2 317 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 POP5Q969H6 163 aaKnown RBP11.91□□□□□ -0.5
DDX39A-202ENST00000324340 MUL1Q969V5 352 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 GIMAP5Q96F15 307 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 LIN37Q96GY3 246 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-202ENST00000324340 LRFN5Q96NI6 719 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 TMEM121BQ9BXQ6 578 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-202ENST00000324340 RBCK1Q9BYM8 510 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 ASPSCR1Q9BZE9 553 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 STRADBQ9C0K7 418 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 C3orf14Q9HBI5 128 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 AKAP7Q9P0M2 348 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-202ENST00000324340 TRPC4Q9UBN4 977 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 MUC6Q6W4X9 2439 aa11.91□□□□□ -0.5
DDX39A-202ENST00000324340 OTOGLQ3ZCN5 2332 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 TCRBV5S2A0A599 114 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 CXCR6O00574 342 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 CPNE3O75131 537 aaKnown RBP11.9□□□□□ -0.5
DDX39A-202ENST00000324340 BCAS1O75363 584 aaPredicted RBP11.9□□□□□ -0.5
DDX39A-202ENST00000324340 TIPRLO75663 272 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 CDC123O75794 336 aaPredicted RBP11.9□□□□□ -0.5
DDX39A-202ENST00000324340 GABARAPO95166 117 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 GNAO1P09471 354 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 NUDT7P0C024 238 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 ETFAP13804 333 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 NCK1P16333 377 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 PTGER1P34995 402 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 PCGF2P35227 344 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 CRATP43155 626 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 MAPK10P53779 464 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 TPTEP56180 551 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 TUBA1BP68363 451 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 DCDP81605 110 aaKnown RBP11.9□□□□□ -0.5
DDX39A-202ENST00000324340 EEF1A2Q05639 463 aaKnown RBP11.9□□□□□ -0.5
DDX39A-202ENST00000324340 RIPPLY1Q0D2K3 151 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 STX4Q12846 297 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 MAP4K2Q12851 820 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 TP53BP2Q13625 1128 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 SF3B4Q15427 424 aaKnown RBP eCLIP11.9□□□□□ -0.56e-8■■■□□ 17.7
DDX39A-202ENST00000324340 NKAIN1Q4KMZ8 207 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 SMUG1Q53HV7 270 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 GCNT6Q5T4J0 391 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 C6orf183Q5T699 404 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 XAF1Q6GPH4 301 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 SIGIRRQ6IA17 410 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 ANGPTL8Q6UXH0 198 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 CYP2R1Q6VVX0 501 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 TUBA1AQ71U36 451 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 SPPL2CQ8IUH8 684 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 HORMAD2Q8N7B1 307 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 C11orf65Q8NCR3 313 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 CANT1Q8WVQ1 401 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 KAT2AQ92830 837 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 CLIP3Q96DZ5 547 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 PELOQ9BRX2 385 aaKnown RBP11.9□□□□□ -0.5
DDX39A-202ENST00000324340 ALOXE3Q9BYJ1 711 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 SLC7A5P2Q9GIP4 190 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms