RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 FAM110BQ8TC76 370 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 PMM1Q92871 262 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 MAL2Q969L2 176 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 TMEM19Q96HH6 336 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 GAL3ST4Q96RP7 486 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 CCNL2Q96S94 520 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-201ENST00000320054 SDF2Q99470 211 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 NXF5Q9H1B4 397 aaKnown RBP12.59□□□□□ -0.39
PRPF18-201ENST00000320054 GORASP2Q9H8Y8 452 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 BCL2L10Q9HD36 194 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 POLE3Q9NRF9 147 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 ACTR3BQ9P1U1 418 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 ANGPT4Q9Y264 503 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 SNX13Q9Y5W8 968 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 A0A0G2JPF8 293 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 GXYLT2A0PJZ3 443 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 TMEM200CA6NKL6 621 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 HNRNPCL2B2RXH8 293 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 HNRNPCL3B7ZW38 293 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 C5orf58C9J3I9 102 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 ANKRD65E5RJM6 399 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 CXCR6O00574 342 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 ARPC2O15144 300 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 KLK10O43240 276 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 SLC28A2O43868 658 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 PRKNO60260 465 aaPredicted RBP12.58□□□□□ -0.4
PRPF18-201ENST00000320054 GMNNO75496 209 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 KCNK2O95069 426 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 BCHEP06276 602 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 HNRNPCL4P0DMR1 293 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 WT1P19544 449 aaPredicted RBP12.58□□□□□ -0.4
PRPF18-201ENST00000320054 NR0B1P51843 470 aaKnown RBP12.58□□□□□ -0.4
PRPF18-201ENST00000320054 CRISP3P54108 245 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 PCBP3P57721 371 aaKnown RBP12.58□□□□□ -0.4
PRPF18-201ENST00000320054 MRPS22P82650 360 aaKnown RBP12.58□□□□□ -0.4
PRPF18-201ENST00000320054 MS4A2Q01362 244 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 Q0VFX4 171 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 AIMP2Q13155 320 aaKnown RBP12.58□□□□□ -0.4
PRPF18-201ENST00000320054 SRSF6Q13247 344 aaKnown RBP12.58□□□□□ -0.4
PRPF18-201ENST00000320054 SYPL1Q16563 259 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 GPAT3Q53EU6 434 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 DCAF10Q5QP82 559 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 DCST2Q5T1A1 773 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 GLYATQ6IB77 296 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 LCN8Q6JVE9 175 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 LRRC74BQ6ZQY2 392 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 PATL1Q86TB9 770 aaKnown RBP12.58□□□□□ -0.4
PRPF18-201ENST00000320054 ANKFN1Q8N957 763 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 TMEM102Q8N9M5 508 aaPredicted RBP12.58□□□□□ -0.4
PRPF18-201ENST00000320054 BBS10Q8TAM1 723 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 PIK3R3Q92569 461 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 CCDC124Q96CT7 223 aaKnown RBP12.58□□□□□ -0.4
PRPF18-201ENST00000320054 PCDHAC1Q9H158 963 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 ATP13A2Q9NQ11 1180 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 MYOTQ9UBF9 498 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 EGFL7Q9UHF1 273 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 MRTO4Q9UKD2 239 aaKnown RBP12.58□□□□□ -0.4
PRPF18-201ENST00000320054 CBLCQ9ULV8 474 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 OR10H1Q9Y4A9 318 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 DSPPQ9NZW4 1301 aa12.58□□□□□ -0.4
PRPF18-201ENST00000320054 NKX2-8O15522 239 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 STX11O75558 287 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 PDE9AO76083 593 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 PGM3O95394 542 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 STAMBPO95630 424 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 CHRM4P08173 479 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 CELA2AP08217 269 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 ITGAMP11215 1152 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 NAGAP17050 411 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 LCN1P31025 176 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 EIF2S3P41091 472 aaKnown RBP12.57□□□□□ -0.4
PRPF18-201ENST00000320054 PSMD4P55036 377 aaKnown RBP12.57□□□□□ -0.4
PRPF18-201ENST00000320054 RRADP55042 308 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 POLE2P56282 527 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 SOX8P57073 446 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 HPCAP84074 193 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 CDC20Q12834 499 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 DECR1Q16698 335 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.57□□□□□ -0.4
PRPF18-201ENST00000320054 MTX3Q5HYI7 312 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 DHFR2Q86XF0 187 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 TAGAPQ8N103 731 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 SLC34A3Q8N130 599 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 SLC15A4Q8N697 577 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 AMER2Q8N7J2 671 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 FAM13CQ8NE31 585 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 POP5Q969H6 163 aaKnown RBP12.57□□□□□ -0.4
PRPF18-201ENST00000320054 RMND5BQ96G75 393 aaPredicted RBP12.57□□□□□ -0.4
PRPF18-201ENST00000320054 NAF1Q96HR8 494 aaKnown RBP12.57□□□□□ -0.4
PRPF18-201ENST00000320054 TREX2Q9BQ50 279 aaPredicted RBP12.57□□□□□ -0.4
PRPF18-201ENST00000320054 G6PC3Q9BUM1 346 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 TRIM15Q9C019 465 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 ZNF350Q9GZX5 532 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 SAP130Q9H0E3 1048 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 SLC38A1Q9H2H9 487 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 WDR70Q9NW82 654 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 POLHQ9Y253 713 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 NCOR2Q9Y618 2525 aa12.57□□□□□ -0.4
PRPF18-201ENST00000320054 EFSO43281 561 aa12.56□□□□□ -0.4
PRPF18-201ENST00000320054 GCM2O75603 506 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms